Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 AC004466.1-201ENST00000599515 1080 ntBASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 CICP14-201ENST00000629111 2732 ntBASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV5-4A0A0C4DH59 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 AL355864.2-201ENST00000447420 863 ntBASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 AC025279.2-201ENST00000569730 653 ntBASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 RN7SL48P-201ENST00000579283 293 ntBASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 BTNL10-201ENST00000595971 695 ntBASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV5-4A0A0C4DH59 AC018665.1-201ENST00000622927 1362 ntBASIC14.96□□□□□ -0.02
TRBV5-4A0A0C4DH59 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV5-4A0A0C4DH59 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV5-4A0A0C4DH59 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV5-4A0A0C4DH59 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
TRBV5-4A0A0C4DH59 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 AC023824.1-201ENST00000562945 2975 ntBASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 POM121L8P-201ENST00000417732 1281 ntBASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 AC245100.3-201ENST00000441281 285 ntBASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 POM121L9P-203ENST00000441984 1285 ntBASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 GAPDHP21-201ENST00000450301 1010 ntBASIC14.95□□□□□ -0.02
TRBV5-4A0A0C4DH59 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms