Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.49■□□□□ 0.55
DDX49Q9Y6V7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 AP001282.1-201ENST00000531301 1499 ntBASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 DGCR5-201ENST00000399539 862 ntBASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 AL365330.1-201ENST00000607459 531 ntBASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX49Q9Y6V7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms