Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.52■□□□□ 0.23
SSX2IPQ9Y2D8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.52■□□□□ 0.23
SSX2IPQ9Y2D8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.52■□□□□ 0.23
SSX2IPQ9Y2D8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.52■□□□□ 0.23
SSX2IPQ9Y2D8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.52■□□□□ 0.23
SSX2IPQ9Y2D8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SSX2IPQ9Y2D8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SSX2IPQ9Y2D8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SSX2IPQ9Y2D8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SSX2IPQ9Y2D8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SSX2IPQ9Y2D8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SSX2IPQ9Y2D8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.52■□□□□ 0.23
SSX2IPQ9Y2D8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 MTHFR-217ENST00000641820 1569 ntBASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 KRT8P35-201ENST00000483942 1338 ntBASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 AC114812.1-204ENST00000449669 728 ntBASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 AC108725.1-201ENST00000495472 409 ntBASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 AC018892.3-201ENST00000623986 2499 ntBASIC16.51■□□□□ 0.23
SSX2IPQ9Y2D8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 AC091271.1-201ENST00000611877 1162 ntBASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 GPR182-203ENST00000622922 591 ntBASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 AC023824.1-201ENST00000562945 2975 ntBASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX2IPQ9Y2D8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms