Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 AC006504.5-208ENST00000588784 2401 ntBASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 AC027612.1-201ENST00000445234 2395 ntBASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 AC023274.1-201ENST00000418278 595 ntBASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 BX842568.4-201ENST00000421222 227 ntBASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 MROH4P-201ENST00000431302 1578 ntBASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 SPCS2P4-201ENST00000436160 681 ntBASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 LINC01225-203ENST00000563550 1244 ntBASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 AP3S2-216ENST00000617003 1561 ntBASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 AC084121.4-201ENST00000641598 221 ntBASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 AF228730.8-201ENST00000642140 221 ntBASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
PCDHB16Q9NRJ7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 AC099521.3-201ENST00000624251 2938 ntBASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 AC073869.1-201ENST00000415574 2762 ntBASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 YBX2P1-201ENST00000394192 760 ntBASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 AL592309.1-201ENST00000443127 649 ntBASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 TIMM8BP1-201ENST00000452384 211 ntBASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.42□□□□□ -0.26
PCDHB16Q9NRJ7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms