Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 EIF3FP3-201ENST00000434851 1086 ntBASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 DUX4L47-201ENST00000566374 394 ntBASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 MIR3147-201ENST00000577811 66 ntBASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 AF254983.2-201ENST00000612331 135 ntBASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 AC022748.3-201ENST00000621828 275 ntBASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 AP001002.3-201ENST00000623482 206 ntBASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 MROH4P-201ENST00000431302 1578 ntBASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 AC023024.2-201ENST00000623561 1993 ntBASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 AL354877.1-201ENST00000424412 413 ntBASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 AC011742.3-201ENST00000439053 820 ntBASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 AL596276.2-201ENST00000447525 331 ntBASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 HIST2H2BB-201ENST00000449108 381 ntBASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 AC026740.1-201ENST00000607068 791 ntBASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 ZACNP1-201ENST00000612259 710 ntBASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 AC100757.4-201ENST00000626934 759 ntBASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM7Q9NR12 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 AC012618.1-201ENST00000461223 412 ntBASIC16.91■□□□□ 0.3
PDLIM7Q9NR12 AP003171.2-201ENST00000528208 925 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms