Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.85□□□□□ -0.19
CHD8Q9HCK8 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 TLE2-205ENST00000586422 389 ntTSL 5 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 WASH3P-207ENST00000560956 1394 ntBASIC13.85□□□□□ -0.19
CHD8Q9HCK8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 AL138725.1-201ENST00000407347 1314 ntBASIC13.85□□□□□ -0.19
CHD8Q9HCK8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 GEMIN8P4-201ENST00000380526 729 ntBASIC13.84□□□□□ -0.19
CHD8Q9HCK8 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 IGHEP2-201ENST00000519308 1256 ntBASIC13.84□□□□□ -0.19
CHD8Q9HCK8 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 RN7SL357P-201ENST00000581065 298 ntBASIC13.84□□□□□ -0.19
CHD8Q9HCK8 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 AC013726.1-201ENST00000563747 2285 ntBASIC13.84□□□□□ -0.19
CHD8Q9HCK8 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 RNA5SP359-201ENST00000364838 113 ntBASIC13.84□□□□□ -0.19
CHD8Q9HCK8 AC108734.2-201ENST00000420887 1069 ntBASIC13.84□□□□□ -0.19
CHD8Q9HCK8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 CASP3-205ENST00000517513 964 ntTSL 5 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 MIR4254-201ENST00000581063 76 ntBASIC13.84□□□□□ -0.19
CHD8Q9HCK8 AC009145.4-201ENST00000625119 1294 ntBASIC13.84□□□□□ -0.19
CHD8Q9HCK8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 AC105020.1-201ENST00000435356 2205 ntBASIC13.84□□□□□ -0.19
CHD8Q9HCK8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CHD8Q9HCK8 AC011676.5-201ENST00000624864 2660 ntBASIC13.83□□□□□ -0.19
CHD8Q9HCK8 AC092570.1-201ENST00000414446 469 ntBASIC13.83□□□□□ -0.19
CHD8Q9HCK8 EEF1DP5-201ENST00000431410 772 ntBASIC13.83□□□□□ -0.19
CHD8Q9HCK8 KRT18P46-201ENST00000435568 1279 ntBASIC13.83□□□□□ -0.19
CHD8Q9HCK8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.83□□□□□ -0.19
CHD8Q9HCK8 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.83□□□□□ -0.19
CHD8Q9HCK8 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CHD8Q9HCK8 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.83□□□□□ -0.19
CHD8Q9HCK8 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.83□□□□□ -0.19
CHD8Q9HCK8 AC078814.4-201ENST00000546650 327 ntBASIC13.83□□□□□ -0.19
CHD8Q9HCK8 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC13.83□□□□□ -0.19
CHD8Q9HCK8 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC13.83□□□□□ -0.19
CHD8Q9HCK8 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
CHD8Q9HCK8 APOC1-209ENST00000592885 562 ntTSL 3 BASIC13.83□□□□□ -0.19
CHD8Q9HCK8 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms