Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 AC084364.1-201ENST00000551967 1556 ntBASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 BOLA2P3-201ENST00000404566 256 ntBASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 ARSEP1-201ENST00000420443 635 ntBASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 AC112492.5-201ENST00000421897 457 ntBASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 ACA64.2-201ENST00000459014 129 ntBASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 USP32P1-208ENST00000506594 1164 ntBASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 SLC25A47P1-201ENST00000531577 414 ntBASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 AL359881.2-201ENST00000602973 570 ntBASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 AL022328.1-201ENST00000610050 478 ntBASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 AC005252.2-201ENST00000624630 1141 ntBASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 AL138799.1-201ENST00000448213 1675 ntBASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 AC018665.1-201ENST00000622927 1362 ntBASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 CLUHP6-201ENST00000580789 941 ntBASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 RPSAP52-203ENST00000622976 1023 ntBASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms