Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TMC1Q8TDI8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TMC1Q8TDI8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TMC1Q8TDI8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC21.28■■□□□ 1
TMC1Q8TDI8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TMC1Q8TDI8 AC148477.4-201ENST00000613430 1793 ntBASIC21.28■■□□□ 1
TMC1Q8TDI8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TMC1Q8TDI8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
TMC1Q8TDI8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
TMC1Q8TDI8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC21.27■■□□□ 1
TMC1Q8TDI8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC21.27■■□□□ 1
TMC1Q8TDI8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC21.27■■□□□ 1
TMC1Q8TDI8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC21.27■■□□□ 1
TMC1Q8TDI8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC21.27■■□□□ 1
TMC1Q8TDI8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC21.27■■□□□ 1
TMC1Q8TDI8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC21.27■■□□□ 1
TMC1Q8TDI8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC21.27■■□□□ 1
TMC1Q8TDI8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC21.27■■□□□ 1
TMC1Q8TDI8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 AL138709.1-201ENST00000614840 1693 ntBASIC21.27■■□□□ 1
TMC1Q8TDI8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMC1Q8TDI8 AC006486.2-201ENST00000624246 2199 ntBASIC21.27■■□□□ 1
TMC1Q8TDI8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
TMC1Q8TDI8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TMC1Q8TDI8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC21.27■□□□□ 0.99
TMC1Q8TDI8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TMC1Q8TDI8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 AC023157.3-201ENST00000619086 2088 ntBASIC21.26■□□□□ 0.99
TMC1Q8TDI8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 MIR1908-201ENST00000410394 80 ntBASIC21.26■□□□□ 0.99
TMC1Q8TDI8 CNN2P8-201ENST00000421872 913 ntBASIC21.26■□□□□ 0.99
TMC1Q8TDI8 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 RNA5SP412-201ENST00000516234 123 ntBASIC21.26■□□□□ 0.99
TMC1Q8TDI8 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 AC078819.1-201ENST00000547454 765 ntBASIC21.26■□□□□ 0.99
TMC1Q8TDI8 AC012085.1-201ENST00000548270 765 ntBASIC21.26■□□□□ 0.99
TMC1Q8TDI8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 RN7SL219P-201ENST00000582872 296 ntBASIC21.26■□□□□ 0.99
TMC1Q8TDI8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC21.26■□□□□ 0.99
TMC1Q8TDI8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC21.26■□□□□ 0.99
TMC1Q8TDI8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMC1Q8TDI8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
TMC1Q8TDI8 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
TMC1Q8TDI8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TMC1Q8TDI8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
TMC1Q8TDI8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC21.25■□□□□ 0.99
TMC1Q8TDI8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMC1Q8TDI8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
TMC1Q8TDI8 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC21.25■□□□□ 0.99
TMC1Q8TDI8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TMC1Q8TDI8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TMC1Q8TDI8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC21.25■□□□□ 0.99
TMC1Q8TDI8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC21.25■□□□□ 0.99
TMC1Q8TDI8 AL590640.2-201ENST00000457038 527 ntBASIC21.25■□□□□ 0.99
TMC1Q8TDI8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
TMC1Q8TDI8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms