Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 AL162274.1-201ENST00000617191 1098 ntBASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 AC005252.2-201ENST00000624630 1141 ntBASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
FNDC9Q8TBE3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 GAPDHP40-201ENST00000505218 1006 ntBASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 KRT17P8-201ENST00000540749 863 ntBASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 HILS1-202ENST00000545329 423 ntBASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 CLUHP6-201ENST00000580789 941 ntBASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
FNDC9Q8TBE3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.81□□□□□ -0.2
FNDC9Q8TBE3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms