Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF2Q8N5M1 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATPAF2Q8N5M1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.71■□□□□ 0.1
ATPAF2Q8N5M1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ATPAF2Q8N5M1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.71■□□□□ 0.1
ATPAF2Q8N5M1 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATPAF2Q8N5M1 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATPAF2Q8N5M1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
ATPAF2Q8N5M1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ATPAF2Q8N5M1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATPAF2Q8N5M1 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
ATPAF2Q8N5M1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 KRT8P22-201ENST00000562317 1415 ntBASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 AL596257.1-201ENST00000641463 2694 ntBASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 TP53TG3HP-202ENST00000569755 579 ntBASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 CTBP2P3-201ENST00000585629 1255 ntBASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 BX539320.1-201ENST00000623759 877 ntBASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ATPAF2Q8N5M1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 REXO1L2P-201ENST00000425429 2069 ntBASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 TNRC18P2-201ENST00000417666 2714 ntBASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 AL158070.2-201ENST00000623713 1621 ntBASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 AC097376.2-205ENST00000610159 5334 ntBASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.69■□□□□ 0.1
ATPAF2Q8N5M1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms