Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.71■□□□□ 0.11
SIX5Q8N196 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.71■□□□□ 0.11
SIX5Q8N196 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.71■□□□□ 0.11
SIX5Q8N196 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SIX5Q8N196 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.71■□□□□ 0.11
SIX5Q8N196 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
SIX5Q8N196 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIX5Q8N196 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIX5Q8N196 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIX5Q8N196 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
SIX5Q8N196 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.71■□□□□ 0.1
SIX5Q8N196 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.71■□□□□ 0.1
SIX5Q8N196 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIX5Q8N196 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIX5Q8N196 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.71■□□□□ 0.1
SIX5Q8N196 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SIX5Q8N196 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.7■□□□□ 0.1
SIX5Q8N196 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.7■□□□□ 0.1
SIX5Q8N196 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
SIX5Q8N196 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.7■□□□□ 0.1
SIX5Q8N196 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.7■□□□□ 0.1
SIX5Q8N196 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.7■□□□□ 0.1
SIX5Q8N196 ACTG1P2-201ENST00000415776 1125 ntBASIC15.7■□□□□ 0.1
SIX5Q8N196 ACTG1P11-201ENST00000425411 1125 ntBASIC15.7■□□□□ 0.1
SIX5Q8N196 AL596276.2-201ENST00000447525 331 ntBASIC15.7■□□□□ 0.1
SIX5Q8N196 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.7■□□□□ 0.1
SIX5Q8N196 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.7■□□□□ 0.1
SIX5Q8N196 AC021723.1-201ENST00000486306 515 ntBASIC15.7■□□□□ 0.1
SIX5Q8N196 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.7■□□□□ 0.1
SIX5Q8N196 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.7■□□□□ 0.1
SIX5Q8N196 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.7■□□□□ 0.1
SIX5Q8N196 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.7■□□□□ 0.1
SIX5Q8N196 IQSEC3P1-201ENST00000538799 536 ntBASIC15.7■□□□□ 0.1
SIX5Q8N196 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.7■□□□□ 0.1
SIX5Q8N196 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.7■□□□□ 0.1
SIX5Q8N196 AL645939.5-201ENST00000606834 243 ntBASIC15.7■□□□□ 0.1
SIX5Q8N196 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC15.7■□□□□ 0.1
SIX5Q8N196 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SIX5Q8N196 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 KRT8P4-201ENST00000509735 1454 ntBASIC15.7■□□□□ 0.1
SIX5Q8N196 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SIX5Q8N196 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SIX5Q8N196 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.7■□□□□ 0.1
SIX5Q8N196 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
SIX5Q8N196 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SIX5Q8N196 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SIX5Q8N196 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SIX5Q8N196 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.69■□□□□ 0.1
SIX5Q8N196 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SIX5Q8N196 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIX5Q8N196 HCG24-202ENST00000414398 717 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms