Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.16■□□□□ 0.5
SLX4Q8IY92 MIR3180-2-201ENST00000581748 88 ntBASIC18.16■□□□□ 0.5
SLX4Q8IY92 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SLX4Q8IY92 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SLX4Q8IY92 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SLX4Q8IY92 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 AC004837.1-201ENST00000446267 564 ntBASIC18.15■□□□□ 0.5
SLX4Q8IY92 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 AP000845.1-201ENST00000581677 2131 ntBASIC18.15■□□□□ 0.5
SLX4Q8IY92 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 AC087392.5-201ENST00000612517 489 ntBASIC18.15■□□□□ 0.5
SLX4Q8IY92 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.15■□□□□ 0.5
SLX4Q8IY92 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLX4Q8IY92 LILRP1-201ENST00000444199 1370 ntBASIC18.15■□□□□ 0.5
SLX4Q8IY92 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.14■□□□□ 0.5
SLX4Q8IY92 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SLX4Q8IY92 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SLX4Q8IY92 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.14■□□□□ 0.5
SLX4Q8IY92 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SLX4Q8IY92 CR383656.3-201ENST00000551315 183 ntBASIC18.14■□□□□ 0.5
SLX4Q8IY92 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.14■□□□□ 0.5
SLX4Q8IY92 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLX4Q8IY92 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.14■□□□□ 0.5
SLX4Q8IY92 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.14■□□□□ 0.49
SLX4Q8IY92 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLX4Q8IY92 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLX4Q8IY92 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.14■□□□□ 0.49
SLX4Q8IY92 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLX4Q8IY92 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.14■□□□□ 0.49
SLX4Q8IY92 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLX4Q8IY92 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC18.14■□□□□ 0.49
SLX4Q8IY92 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLX4Q8IY92 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLX4Q8IY92 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLX4Q8IY92 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.14■□□□□ 0.49
SLX4Q8IY92 NSD1-211ENST00000511258 809 ntTSL 3 BASIC18.14■□□□□ 0.49
SLX4Q8IY92 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC18.14■□□□□ 0.49
SLX4Q8IY92 AC131206.1-201ENST00000538078 1211 ntBASIC18.14■□□□□ 0.49
SLX4Q8IY92 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC18.14■□□□□ 0.49
SLX4Q8IY92 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.14■□□□□ 0.49
SLX4Q8IY92 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLX4Q8IY92 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLX4Q8IY92 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLX4Q8IY92 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLX4Q8IY92 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLX4Q8IY92 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLX4Q8IY92 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLX4Q8IY92 SALL4P5-201ENST00000419001 1760 ntBASIC18.13■□□□□ 0.49
SLX4Q8IY92 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLX4Q8IY92 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLX4Q8IY92 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLX4Q8IY92 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLX4Q8IY92 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.13■□□□□ 0.49
SLX4Q8IY92 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLX4Q8IY92 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLX4Q8IY92 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms