Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 FAM8A4P-201ENST00000435433 1213 ntBASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 AL391280.1-201ENST00000506969 1062 ntBASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 OR10B1P-201ENST00000601666 907 ntBASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 MROH4P-201ENST00000431302 1578 ntBASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 REXO1L2P-201ENST00000425429 2069 ntBASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 AL162727.3-201ENST00000635661 2787 ntBASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 MIR326-201ENST00000362220 95 ntBASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 GOLGA2P4-201ENST00000441462 777 ntBASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 AC106820.3-201ENST00000561653 397 ntBASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 MIR6869-201ENST00000619434 62 ntBASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 AC138466.3-201ENST00000619983 221 ntBASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC60Q8IWA6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 COX5BP1-201ENST00000507622 393 ntBASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 MIR4525-201ENST00000580000 75 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms