Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 VDAC1P7-201ENST00000462417 847 ntBASIC17.24■□□□□ 0.35
SHC4Q6S5L8 DOC2GP-202ENST00000514950 1163 ntBASIC17.24■□□□□ 0.35
SHC4Q6S5L8 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 AC036164.1-201ENST00000570544 333 ntBASIC17.24■□□□□ 0.35
SHC4Q6S5L8 AL049840.4-201ENST00000602422 811 ntBASIC17.24■□□□□ 0.35
SHC4Q6S5L8 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.23■□□□□ 0.35
SHC4Q6S5L8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 GNAQP1-201ENST00000444815 1067 ntBASIC17.23■□□□□ 0.35
SHC4Q6S5L8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC4Q6S5L8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 SPDYE19P-201ENST00000338590 713 ntBASIC17.22■□□□□ 0.35
SHC4Q6S5L8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 TPRX2P-201ENST00000535362 881 ntBASIC17.22■□□□□ 0.35
SHC4Q6S5L8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 AC006538.3-201ENST00000612495 578 ntBASIC17.22■□□□□ 0.35
SHC4Q6S5L8 MIR8072-201ENST00000614241 80 ntBASIC17.22■□□□□ 0.35
SHC4Q6S5L8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms