Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 AL360270.3-201ENST00000609118 1348 ntBASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 PCDHA3-202ENST00000532566 4594 ntBASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 AC004890.2-204ENST00000481968 304 ntBASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 SRD5A3P1-201ENST00000603021 949 ntBASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LETMD1Q6P1Q0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 AC055876.3-201ENST00000431496 288 ntBASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 AC004066.1-201ENST00000502488 802 ntBASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 AC138649.4-201ENST00000612222 287 ntBASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LETMD1Q6P1Q0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms