Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.1■□□□□ 0.01
PKNOX1P55347 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PKNOX1P55347 RPSAP43-201ENST00000402237 625 ntBASIC15.1■□□□□ 0.01
PKNOX1P55347 AL080243.2-201ENST00000418783 582 ntBASIC15.1■□□□□ 0.01
PKNOX1P55347 UPF3AP3-201ENST00000420996 769 ntBASIC15.1■□□□□ 0.01
PKNOX1P55347 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PKNOX1P55347 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.1■□□□□ 0.01
PKNOX1P55347 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PKNOX1P55347 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.1■□□□□ 0.01
PKNOX1P55347 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.1■□□□□ 0.01
PKNOX1P55347 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PKNOX1P55347 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.1■□□□□ 0.01
PKNOX1P55347 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PKNOX1P55347 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.1■□□□□ 0.01
PKNOX1P55347 AC010327.4-202ENST00000591484 748 ntBASIC15.1■□□□□ 0.01
PKNOX1P55347 AL033527.5-202ENST00000641632 1098 ntBASIC15.1■□□□□ 0.01
PKNOX1P55347 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PKNOX1P55347 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PKNOX1P55347 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.1■□□□□ 0.01
PKNOX1P55347 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.1■□□□□ 0.01
PKNOX1P55347 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.1■□□□□ 0.01
PKNOX1P55347 PTENP1-202ENST00000532280 3996 ntBASIC15.1■□□□□ 0.01
PKNOX1P55347 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PKNOX1P55347 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.1■□□□□ 0.01
PKNOX1P55347 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.1■□□□□ 0.01
PKNOX1P55347 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.1■□□□□ 0.01
PKNOX1P55347 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PKNOX1P55347 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PKNOX1P55347 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PKNOX1P55347 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.1■□□□□ 0.01
PKNOX1P55347 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PKNOX1P55347 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PKNOX1P55347 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.1■□□□□ 0.01
PKNOX1P55347 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PKNOX1P55347 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.09■□□□□ 0.01
PKNOX1P55347 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.09■□□□□ 0.01
PKNOX1P55347 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.09■□□□□ 0.01
PKNOX1P55347 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PKNOX1P55347 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
PKNOX1P55347 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 BX842568.4-201ENST00000421222 227 ntBASIC15.09■□□□□ 0.01
PKNOX1P55347 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
PKNOX1P55347 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PKNOX1P55347 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
PKNOX1P55347 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PKNOX1P55347 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.09■□□□□ 0.01
PKNOX1P55347 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.09■□□□□ 0.01
PKNOX1P55347 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.09■□□□□ 0.01
PKNOX1P55347 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.09■□□□□ 0.01
PKNOX1P55347 AC025048.3-201ENST00000590609 569 ntBASIC15.09■□□□□ 0.01
PKNOX1P55347 AC005702.4-201ENST00000618393 416 ntBASIC15.09■□□□□ 0.01
PKNOX1P55347 AL645728.2-202ENST00000641679 227 ntBASIC15.09■□□□□ 0.01
PKNOX1P55347 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.09■□□□□ 0.01
PKNOX1P55347 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.09■□□□□ 0.01
PKNOX1P55347 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PKNOX1P55347 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PKNOX1P55347 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PKNOX1P55347 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PKNOX1P55347 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PKNOX1P55347 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PKNOX1P55347 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.09■□□□□ 0.01
PKNOX1P55347 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PKNOX1P55347 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.09■□□□□ 0.01
PKNOX1P55347 AC006504.5-208ENST00000588784 2401 ntBASIC15.08■□□□□ 0.01
PKNOX1P55347 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PKNOX1P55347 AC007326.2-201ENST00000624224 7579 ntBASIC15.08■□□□□ 0.01
PKNOX1P55347 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PKNOX1P55347 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PKNOX1P55347 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PKNOX1P55347 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.08■□□□□ 0
PKNOX1P55347 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.08■□□□□ 0
PKNOX1P55347 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PKNOX1P55347 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.08■□□□□ 0
PKNOX1P55347 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PKNOX1P55347 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PKNOX1P55347 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
PKNOX1P55347 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PKNOX1P55347 AC211486.1-202ENST00000416371 468 ntBASIC15.08■□□□□ 0
PKNOX1P55347 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.08■□□□□ 0
PKNOX1P55347 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.08■□□□□ 0
PKNOX1P55347 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PKNOX1P55347 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms