Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.76■□□□□ 0.11
ATXN3P54252 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.76■□□□□ 0.11
ATXN3P54252 AL365330.1-201ENST00000607459 531 ntBASIC15.76■□□□□ 0.11
ATXN3P54252 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.76■□□□□ 0.11
ATXN3P54252 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
ATXN3P54252 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ATXN3P54252 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
ATXN3P54252 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.76■□□□□ 0.11
ATXN3P54252 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.76■□□□□ 0.11
ATXN3P54252 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.76■□□□□ 0.11
ATXN3P54252 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 AC099063.4-201ENST00000641099 1602 ntBASIC15.76■□□□□ 0.11
ATXN3P54252 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.75■□□□□ 0.11
ATXN3P54252 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.75■□□□□ 0.11
ATXN3P54252 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
ATXN3P54252 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.75■□□□□ 0.11
ATXN3P54252 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ATXN3P54252 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 ACTG1P3-201ENST00000431775 1114 ntBASIC15.75■□□□□ 0.11
ATXN3P54252 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.75■□□□□ 0.11
ATXN3P54252 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.75■□□□□ 0.11
ATXN3P54252 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.75■□□□□ 0.11
ATXN3P54252 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.75■□□□□ 0.11
ATXN3P54252 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.75■□□□□ 0.11
ATXN3P54252 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.75■□□□□ 0.11
ATXN3P54252 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ATXN3P54252 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.75■□□□□ 0.11
ATXN3P54252 PTP4A1P2-201ENST00000546033 454 ntBASIC15.75■□□□□ 0.11
ATXN3P54252 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.75■□□□□ 0.11
ATXN3P54252 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.75■□□□□ 0.11
ATXN3P54252 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
ATXN3P54252 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
ATXN3P54252 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.75■□□□□ 0.11
ATXN3P54252 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 OR2I1P-210ENST00000642037 4691 ntBASIC15.75■□□□□ 0.11
ATXN3P54252 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.75■□□□□ 0.11
ATXN3P54252 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATXN3P54252 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.75■□□□□ 0.11
ATXN3P54252 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ATXN3P54252 AC106881.1-201ENST00000605849 3329 ntBASIC15.74■□□□□ 0.11
ATXN3P54252 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATXN3P54252 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATXN3P54252 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
ATXN3P54252 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.74■□□□□ 0.11
ATXN3P54252 PCDHA3-202ENST00000532566 4594 ntBASIC15.74■□□□□ 0.11
ATXN3P54252 AC093525.8-201ENST00000624099 1342 ntBASIC15.74■□□□□ 0.11
ATXN3P54252 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ATXN3P54252 AC023157.3-201ENST00000619086 2088 ntBASIC15.74■□□□□ 0.11
ATXN3P54252 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATXN3P54252 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.74■□□□□ 0.11
ATXN3P54252 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.74■□□□□ 0.11
ATXN3P54252 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATXN3P54252 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
ATXN3P54252 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.74■□□□□ 0.11
ATXN3P54252 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.74■□□□□ 0.11
ATXN3P54252 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ATXN3P54252 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.74■□□□□ 0.11
ATXN3P54252 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATXN3P54252 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
ATXN3P54252 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ATXN3P54252 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATXN3P54252 AL355864.2-201ENST00000447420 863 ntBASIC15.74■□□□□ 0.11
ATXN3P54252 BCRP2-202ENST00000447763 634 ntBASIC15.74■□□□□ 0.11
ATXN3P54252 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.74■□□□□ 0.11
ATXN3P54252 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATXN3P54252 BCRP6-201ENST00000510112 632 ntBASIC15.74■□□□□ 0.11
ATXN3P54252 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.74■□□□□ 0.11
ATXN3P54252 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.74■□□□□ 0.11
ATXN3P54252 BCRP7-201ENST00000511549 544 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms