Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.22■□□□□ 0.03
HMGCLP35914 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.22■□□□□ 0.03
HMGCLP35914 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 TDH-203ENST00000531764 1110 ntBASIC15.22■□□□□ 0.03
HMGCLP35914 DUX4L47-201ENST00000566374 394 ntBASIC15.22■□□□□ 0.03
HMGCLP35914 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.22■□□□□ 0.03
HMGCLP35914 AC015936.2-201ENST00000593177 259 ntBASIC15.22■□□□□ 0.03
HMGCLP35914 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HMGCLP35914 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 AL137783.1-201ENST00000623494 1896 ntBASIC15.22■□□□□ 0.03
HMGCLP35914 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGCLP35914 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HMGCLP35914 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGCLP35914 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HMGCLP35914 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
HMGCLP35914 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGCLP35914 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 MSTO2P-201ENST00000314835 1709 ntBASIC15.21■□□□□ 0.03
HMGCLP35914 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
HMGCLP35914 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.21■□□□□ 0.03
HMGCLP35914 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGCLP35914 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.21■□□□□ 0.03
HMGCLP35914 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.21■□□□□ 0.03
HMGCLP35914 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGCLP35914 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HMGCLP35914 AC022616.1-201ENST00000518688 554 ntBASIC15.21■□□□□ 0.03
HMGCLP35914 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.21■□□□□ 0.03
HMGCLP35914 AC068587.3-201ENST00000526613 355 ntBASIC15.21■□□□□ 0.03
HMGCLP35914 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.21■□□□□ 0.03
HMGCLP35914 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGCLP35914 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HMGCLP35914 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HMGCLP35914 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGCLP35914 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGCLP35914 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HMGCLP35914 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HMGCLP35914 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.21■□□□□ 0.02
HMGCLP35914 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.21■□□□□ 0.02
HMGCLP35914 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.21■□□□□ 0.02
HMGCLP35914 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.21■□□□□ 0.02
HMGCLP35914 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HMGCLP35914 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
HMGCLP35914 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HMGCLP35914 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 KRT8P35-201ENST00000483942 1338 ntBASIC15.2■□□□□ 0.02
HMGCLP35914 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.2■□□□□ 0.02
HMGCLP35914 AC134312.5-201ENST00000568031 1313 ntBASIC15.2■□□□□ 0.02
HMGCLP35914 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.2■□□□□ 0.02
HMGCLP35914 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.2■□□□□ 0.02
HMGCLP35914 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.2■□□□□ 0.02
HMGCLP35914 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.2■□□□□ 0.02
HMGCLP35914 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HMGCLP35914 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
HMGCLP35914 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HMGCLP35914 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.2■□□□□ 0.02
HMGCLP35914 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.2■□□□□ 0.02
HMGCLP35914 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.2■□□□□ 0.02
HMGCLP35914 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.2■□□□□ 0.02
HMGCLP35914 GIMAP3P-201ENST00000495150 836 ntBASIC15.2■□□□□ 0.02
HMGCLP35914 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.2■□□□□ 0.02
HMGCLP35914 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.2■□□□□ 0.02
HMGCLP35914 AC132938.2-201ENST00000579188 680 ntBASIC15.2■□□□□ 0.02
HMGCLP35914 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.2■□□□□ 0.02
HMGCLP35914 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.2■□□□□ 0.02
HMGCLP35914 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGCLP35914 AC012645.4-201ENST00000610691 1061 ntBASIC15.2■□□□□ 0.02
HMGCLP35914 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.2■□□□□ 0.02
HMGCLP35914 AL591163.1-201ENST00000641757 987 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms