Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC107373.2-201ENST00000607735 490 ntBASIC13.16□□□□□ -0.3
CCL1P22362 AC008738.7-201ENST00000609744 511 ntBASIC13.16□□□□□ -0.3
CCL1P22362 AC004840.1-201ENST00000636359 365 ntBASIC13.16□□□□□ -0.3
CCL1P22362 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CCL1P22362 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CCL1P22362 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCL1P22362 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCL1P22362 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL1P22362 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL1P22362 AL158070.2-201ENST00000623713 1621 ntBASIC13.16□□□□□ -0.3
CCL1P22362 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
CCL1P22362 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CCL1P22362 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCL1P22362 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL1P22362 AL138799.1-201ENST00000448213 1675 ntBASIC13.15□□□□□ -0.3
CCL1P22362 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCL1P22362 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL1P22362 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CCL1P22362 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCL1P22362 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL1P22362 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
CCL1P22362 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCL1P22362 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CCL1P22362 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.15□□□□□ -0.3
CCL1P22362 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL1P22362 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL1P22362 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL1P22362 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL1P22362 AC004890.2-204ENST00000481968 304 ntBASIC13.15□□□□□ -0.3
CCL1P22362 IGHV3-42-201ENST00000520410 361 ntBASIC13.15□□□□□ -0.3
CCL1P22362 AC135586.1-201ENST00000539323 574 ntBASIC13.15□□□□□ -0.3
CCL1P22362 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL1P22362 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL1P22362 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL1P22362 AL662799.1-202ENST00000614205 422 ntBASIC13.15□□□□□ -0.3
CCL1P22362 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCL1P22362 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCL1P22362 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 AP001267.2-201ENST00000532619 2086 ntBASIC13.15□□□□□ -0.3
CCL1P22362 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL1P22362 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL1P22362 HSPA7-201ENST00000445535 1927 ntBASIC13.15□□□□□ -0.3
CCL1P22362 AC022144.1-201ENST00000602255 1580 ntBASIC13.15□□□□□ -0.3
CCL1P22362 AC023090.2-201ENST00000625182 2110 ntBASIC13.15□□□□□ -0.3
CCL1P22362 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.15□□□□□ -0.31
CCL1P22362 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCL1P22362 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCL1P22362 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL1P22362 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CCL1P22362 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL1P22362 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL1P22362 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL1P22362 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.14□□□□□ -0.31
CCL1P22362 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.14□□□□□ -0.31
CCL1P22362 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.14□□□□□ -0.31
CCL1P22362 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL1P22362 DUX4L27-201ENST00000554796 1261 ntBASIC13.14□□□□□ -0.31
CCL1P22362 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms