Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC130P13994 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC130P13994 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC130P13994 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC130P13994 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC130P13994 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC130P13994 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CCDC130P13994 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC130P13994 KRT8P35-201ENST00000483942 1338 ntBASIC16.21■□□□□ 0.19
CCDC130P13994 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCDC130P13994 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC130P13994 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCDC130P13994 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC130P13994 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC130P13994 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC130P13994 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC130P13994 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC130P13994 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC130P13994 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC130P13994 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC130P13994 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.21■□□□□ 0.19
CCDC130P13994 AL139094.1-201ENST00000405549 1188 ntBASIC16.21■□□□□ 0.19
CCDC130P13994 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC130P13994 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC130P13994 HLA-K-203ENST00000430151 1046 ntBASIC16.21■□□□□ 0.19
CCDC130P13994 AL355864.2-201ENST00000447420 863 ntBASIC16.21■□□□□ 0.19
CCDC130P13994 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CCDC130P13994 KRT18P25-201ENST00000508931 1278 ntBASIC16.21■□□□□ 0.19
CCDC130P13994 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC130P13994 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC130P13994 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC130P13994 PRSS30P-206ENST00000641773 873 ntBASIC16.21■□□□□ 0.19
CCDC130P13994 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCDC130P13994 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC130P13994 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC130P13994 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
CCDC130P13994 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC130P13994 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC130P13994 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCDC130P13994 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC130P13994 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.21■□□□□ 0.18
CCDC130P13994 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CCDC130P13994 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.21■□□□□ 0.18
CCDC130P13994 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC130P13994 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC130P13994 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC130P13994 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC130P13994 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC130P13994 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC130P13994 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC130P13994 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC130P13994 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC130P13994 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC130P13994 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CCDC130P13994 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC130P13994 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC130P13994 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC130P13994 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC130P13994 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC130P13994 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC130P13994 AC005229.1-201ENST00000392885 409 ntBASIC16.2■□□□□ 0.18
CCDC130P13994 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.2■□□□□ 0.18
CCDC130P13994 NUS1P3-201ENST00000423502 862 ntBASIC16.2■□□□□ 0.18
CCDC130P13994 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC130P13994 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC130P13994 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC130P13994 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC130P13994 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC130P13994 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC130P13994 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC130P13994 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC130P13994 RAB43P1-201ENST00000561790 589 ntBASIC16.2■□□□□ 0.18
CCDC130P13994 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.2■□□□□ 0.18
CCDC130P13994 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC130P13994 AL022328.1-201ENST00000610050 478 ntBASIC16.2■□□□□ 0.18
CCDC130P13994 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC130P13994 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC130P13994 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC130P13994 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC130P13994 AP002414.2-201ENST00000591780 3365 ntBASIC16.2■□□□□ 0.18
CCDC130P13994 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC130P13994 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC130P13994 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC130P13994 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC130P13994 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC130P13994 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC130P13994 AC006486.2-201ENST00000624246 2199 ntBASIC16.2■□□□□ 0.18
CCDC130P13994 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC130P13994 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CCDC130P13994 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CCDC130P13994 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC130P13994 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC130P13994 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC130P13994 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC130P13994 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCDC130P13994 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC130P13994 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC130P13994 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC130P13994 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC130P13994 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms