Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HTR1AP08908 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.02□□□□□ -0.17
HTR1AP08908 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
HTR1AP08908 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.02□□□□□ -0.17
HTR1AP08908 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.02□□□□□ -0.17
HTR1AP08908 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.02□□□□□ -0.17
HTR1AP08908 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.02□□□□□ -0.17
HTR1AP08908 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.02□□□□□ -0.17
HTR1AP08908 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.02□□□□□ -0.17
HTR1AP08908 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.02□□□□□ -0.17
HTR1AP08908 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.02□□□□□ -0.17
HTR1AP08908 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.02□□□□□ -0.17
HTR1AP08908 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.02□□□□□ -0.17
HTR1AP08908 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.02□□□□□ -0.17
HTR1AP08908 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.02□□□□□ -0.17
HTR1AP08908 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
HTR1AP08908 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
HTR1AP08908 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HTR1AP08908 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1AP08908 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.01□□□□□ -0.17
HTR1AP08908 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
HTR1AP08908 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 AL607033.1-201ENST00000623900 1599 ntBASIC14.01□□□□□ -0.17
HTR1AP08908 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.01□□□□□ -0.17
HTR1AP08908 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 KRT8P37-201ENST00000451609 1420 ntBASIC14.01□□□□□ -0.17
HTR1AP08908 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.01□□□□□ -0.17
HTR1AP08908 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 AC004870.1-201ENST00000315132 882 ntBASIC14.01□□□□□ -0.17
HTR1AP08908 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.01□□□□□ -0.17
HTR1AP08908 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
HTR1AP08908 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.01□□□□□ -0.17
HTR1AP08908 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 AC098859.1-201ENST00000502915 1238 ntBASIC14.01□□□□□ -0.17
HTR1AP08908 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.01□□□□□ -0.17
HTR1AP08908 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.01□□□□□ -0.17
HTR1AP08908 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
HTR1AP08908 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.01□□□□□ -0.17
HTR1AP08908 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
HTR1AP08908 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HTR1AP08908 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 AC004877.2-201ENST00000623941 599 ntBASIC14.01□□□□□ -0.17
HTR1AP08908 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.01□□□□□ -0.17
HTR1AP08908 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HTR1AP08908 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
HTR1AP08908 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HTR1AP08908 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HTR1AP08908 AC055811.4-201ENST00000624039 1754 ntBASIC14.01□□□□□ -0.17
HTR1AP08908 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1AP08908 NUTM2HP-201ENST00000442076 2498 ntBASIC14.01□□□□□ -0.17
HTR1AP08908 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms