Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM3O75382 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRIM3O75382 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TRIM3O75382 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRIM3O75382 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRIM3O75382 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIM3O75382 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.36□□□□□ -0.11
TRIM3O75382 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM3O75382 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 AC008494.3-201ENST00000606615 944 ntBASIC14.36□□□□□ -0.11
TRIM3O75382 AC093726.1-201ENST00000608064 963 ntBASIC14.36□□□□□ -0.11
TRIM3O75382 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIM3O75382 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRIM3O75382 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM3O75382 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM3O75382 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM3O75382 SSR4P1-203ENST00000599569 2260 ntBASIC14.36□□□□□ -0.11
TRIM3O75382 AC138969.3-201ENST00000546612 1459 ntBASIC14.36□□□□□ -0.11
TRIM3O75382 AC138932.2-201ENST00000548268 1459 ntBASIC14.36□□□□□ -0.11
TRIM3O75382 AC126755.4-201ENST00000549796 1459 ntBASIC14.36□□□□□ -0.11
TRIM3O75382 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 CICP14-201ENST00000629111 2732 ntBASIC14.35□□□□□ -0.11
TRIM3O75382 AC020658.6-201ENST00000623564 1870 ntBASIC14.35□□□□□ -0.11
TRIM3O75382 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
TRIM3O75382 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM3O75382 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM3O75382 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM3O75382 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM3O75382 RN7SL692P-201ENST00000464677 288 ntBASIC14.35□□□□□ -0.11
TRIM3O75382 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRIM3O75382 AC123567.1-201ENST00000548294 1261 ntBASIC14.35□□□□□ -0.11
TRIM3O75382 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM3O75382 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
TRIM3O75382 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM3O75382 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM3O75382 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM3O75382 AC012645.4-201ENST00000610691 1061 ntBASIC14.35□□□□□ -0.11
TRIM3O75382 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 AC007431.3-201ENST00000623221 587 ntBASIC14.35□□□□□ -0.11
TRIM3O75382 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM3O75382 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM3O75382 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM3O75382 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM3O75382 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM3O75382 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRIM3O75382 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM3O75382 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM3O75382 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRIM3O75382 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRIM3O75382 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRIM3O75382 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 OR2I1P-210ENST00000642037 4691 ntBASIC14.35□□□□□ -0.11
TRIM3O75382 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM3O75382 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRIM3O75382 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM3O75382 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms