Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MIR6089-201ENST00000616698 64 ntBASIC21.23■□□□□ 0.99
LRFN1Q9P244 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.23■□□□□ 0.99
LRFN1Q9P244 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.23■□□□□ 0.99
LRFN1Q9P244 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRFN1Q9P244 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.23■□□□□ 0.99
LRFN1Q9P244 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRFN1Q9P244 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
LRFN1Q9P244 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRFN1Q9P244 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRFN1Q9P244 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
LRFN1Q9P244 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LRFN1Q9P244 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.22■□□□□ 0.99
LRFN1Q9P244 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.22■□□□□ 0.99
LRFN1Q9P244 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN1Q9P244 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN1Q9P244 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN1Q9P244 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.21■□□□□ 0.99
LRFN1Q9P244 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LRFN1Q9P244 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.21■□□□□ 0.99
LRFN1Q9P244 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.21■□□□□ 0.99
LRFN1Q9P244 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LRFN1Q9P244 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN1Q9P244 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.2■□□□□ 0.98
LRFN1Q9P244 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRFN1Q9P244 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRFN1Q9P244 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.2■□□□□ 0.98
LRFN1Q9P244 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRFN1Q9P244 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRFN1Q9P244 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
LRFN1Q9P244 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
LRFN1Q9P244 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRFN1Q9P244 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.19■□□□□ 0.98
LRFN1Q9P244 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRFN1Q9P244 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRFN1Q9P244 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.19■□□□□ 0.98
LRFN1Q9P244 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.19■□□□□ 0.98
LRFN1Q9P244 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LRFN1Q9P244 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRFN1Q9P244 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.18■□□□□ 0.98
LRFN1Q9P244 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.18■□□□□ 0.98
LRFN1Q9P244 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRFN1Q9P244 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LRFN1Q9P244 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.18■□□□□ 0.98
LRFN1Q9P244 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRFN1Q9P244 MIR4466-201ENST00000606121 54 ntBASIC21.18■□□□□ 0.98
LRFN1Q9P244 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LRFN1Q9P244 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRFN1Q9P244 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRFN1Q9P244 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.18■□□□□ 0.98
LRFN1Q9P244 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LRFN1Q9P244 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRFN1Q9P244 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.17■□□□□ 0.98
LRFN1Q9P244 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.17■□□□□ 0.98
LRFN1Q9P244 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRFN1Q9P244 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRFN1Q9P244 AL512631.2-201ENST00000604634 923 ntBASIC21.17■□□□□ 0.98
LRFN1Q9P244 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LRFN1Q9P244 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRFN1Q9P244 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
LRFN1Q9P244 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRFN1Q9P244 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRFN1Q9P244 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRFN1Q9P244 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRFN1Q9P244 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRFN1Q9P244 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRFN1Q9P244 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRFN1Q9P244 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRFN1Q9P244 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LRFN1Q9P244 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRFN1Q9P244 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.16■□□□□ 0.98
LRFN1Q9P244 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRFN1Q9P244 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRFN1Q9P244 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRFN1Q9P244 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRFN1Q9P244 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRFN1Q9P244 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRFN1Q9P244 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRFN1Q9P244 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LRFN1Q9P244 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
LRFN1Q9P244 AC131274.2-201ENST00000580697 1507 ntBASIC21.14■□□□□ 0.98
LRFN1Q9P244 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LRFN1Q9P244 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRFN1Q9P244 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRFN1Q9P244 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRFN1Q9P244 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.14■□□□□ 0.97
LRFN1Q9P244 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.14■□□□□ 0.97
LRFN1Q9P244 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
LRFN1Q9P244 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRFN1Q9P244 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.14■□□□□ 0.97
LRFN1Q9P244 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRFN1Q9P244 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.14■□□□□ 0.97
LRFN1Q9P244 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN1Q9P244 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
LRFN1Q9P244 AC005703.6-201ENST00000623265 1329 ntBASIC21.13■□□□□ 0.97
LRFN1Q9P244 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN1Q9P244 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.13■□□□□ 0.97
LRFN1Q9P244 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.13■□□□□ 0.97
LRFN1Q9P244 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN1Q9P244 AL139246.5-201ENST00000606645 996 ntBASIC21.13■□□□□ 0.97
LRFN1Q9P244 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms