Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
FOXC2Q99958 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.55■□□□□ 0.72
FOXC2Q99958 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXC2Q99958 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXC2Q99958 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXC2Q99958 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
FOXC2Q99958 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXC2Q99958 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXC2Q99958 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXC2Q99958 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXC2Q99958 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXC2Q99958 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXC2Q99958 KRT18P5-201ENST00000436075 1291 ntBASIC19.54■□□□□ 0.72
FOXC2Q99958 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
FOXC2Q99958 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.54■□□□□ 0.72
FOXC2Q99958 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.54■□□□□ 0.72
FOXC2Q99958 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
FOXC2Q99958 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
FOXC2Q99958 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXC2Q99958 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.53■□□□□ 0.72
FOXC2Q99958 AP004609.3-201ENST00000610705 1884 ntBASIC19.52■□□□□ 0.72
FOXC2Q99958 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXC2Q99958 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXC2Q99958 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXC2Q99958 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXC2Q99958 AC099791.2-201ENST00000605725 427 ntBASIC19.52■□□□□ 0.72
FOXC2Q99958 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXC2Q99958 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
FOXC2Q99958 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
FOXC2Q99958 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
FOXC2Q99958 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXC2Q99958 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXC2Q99958 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
FOXC2Q99958 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXC2Q99958 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXC2Q99958 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXC2Q99958 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXC2Q99958 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXC2Q99958 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.5■□□□□ 0.71
FOXC2Q99958 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXC2Q99958 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXC2Q99958 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXC2Q99958 YBX1P1-201ENST00000445822 960 ntBASIC19.5■□□□□ 0.71
FOXC2Q99958 AC233992.3-201ENST00000607491 485 ntBASIC19.5■□□□□ 0.71
FOXC2Q99958 AC136469.2-201ENST00000623944 1028 ntBASIC19.5■□□□□ 0.71
FOXC2Q99958 AC092437.1-201ENST00000624794 1048 ntBASIC19.5■□□□□ 0.71
FOXC2Q99958 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.5■□□□□ 0.71
FOXC2Q99958 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXC2Q99958 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXC2Q99958 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.5■□□□□ 0.71
FOXC2Q99958 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXC2Q99958 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXC2Q99958 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXC2Q99958 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
FOXC2Q99958 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXC2Q99958 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.49■□□□□ 0.71
FOXC2Q99958 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXC2Q99958 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXC2Q99958 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
FOXC2Q99958 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
FOXC2Q99958 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXC2Q99958 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXC2Q99958 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
FOXC2Q99958 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXC2Q99958 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXC2Q99958 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXC2Q99958 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXC2Q99958 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXC2Q99958 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXC2Q99958 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXC2Q99958 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXC2Q99958 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXC2Q99958 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXC2Q99958 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXC2Q99958 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
FOXC2Q99958 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXC2Q99958 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.47■□□□□ 0.71
FOXC2Q99958 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.47■□□□□ 0.71
FOXC2Q99958 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXC2Q99958 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.47■□□□□ 0.71
FOXC2Q99958 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.47■□□□□ 0.71
FOXC2Q99958 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXC2Q99958 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXC2Q99958 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXC2Q99958 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXC2Q99958 BX842568.3-201ENST00000418104 571 ntBASIC19.46■□□□□ 0.71
FOXC2Q99958 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.46■□□□□ 0.71
FOXC2Q99958 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.46■□□□□ 0.71
FOXC2Q99958 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXC2Q99958 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXC2Q99958 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXC2Q99958 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXC2Q99958 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.45■□□□□ 0.7
FOXC2Q99958 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.45■□□□□ 0.7
FOXC2Q99958 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
FOXC2Q99958 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
FOXC2Q99958 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXC2Q99958 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXC2Q99958 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXC2Q99958 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms