Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NR1H4Q96RI1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NR1H4Q96RI1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NR1H4Q96RI1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.73■■□□□ 1.07
NR1H4Q96RI1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.73■■□□□ 1.07
NR1H4Q96RI1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NR1H4Q96RI1 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.73■■□□□ 1.07
NR1H4Q96RI1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.73■■□□□ 1.07
NR1H4Q96RI1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NR1H4Q96RI1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NR1H4Q96RI1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NR1H4Q96RI1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.72■■□□□ 1.07
NR1H4Q96RI1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NR1H4Q96RI1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.72■■□□□ 1.07
NR1H4Q96RI1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.72■■□□□ 1.07
NR1H4Q96RI1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NR1H4Q96RI1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.72■■□□□ 1.07
NR1H4Q96RI1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
NR1H4Q96RI1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.71■■□□□ 1.07
NR1H4Q96RI1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NR1H4Q96RI1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.71■■□□□ 1.07
NR1H4Q96RI1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.71■■□□□ 1.07
NR1H4Q96RI1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NR1H4Q96RI1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NR1H4Q96RI1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NR1H4Q96RI1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NR1H4Q96RI1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NR1H4Q96RI1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
NR1H4Q96RI1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
NR1H4Q96RI1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NR1H4Q96RI1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.7■■□□□ 1.06
NR1H4Q96RI1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NR1H4Q96RI1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NR1H4Q96RI1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NR1H4Q96RI1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NR1H4Q96RI1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NR1H4Q96RI1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NR1H4Q96RI1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NR1H4Q96RI1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.69■■□□□ 1.06
NR1H4Q96RI1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.69■■□□□ 1.06
NR1H4Q96RI1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NR1H4Q96RI1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NR1H4Q96RI1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NR1H4Q96RI1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NR1H4Q96RI1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
NR1H4Q96RI1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NR1H4Q96RI1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NR1H4Q96RI1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NR1H4Q96RI1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NR1H4Q96RI1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NR1H4Q96RI1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.68■■□□□ 1.06
NR1H4Q96RI1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NR1H4Q96RI1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NR1H4Q96RI1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
NR1H4Q96RI1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NR1H4Q96RI1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NR1H4Q96RI1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.67■■□□□ 1.06
NR1H4Q96RI1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NR1H4Q96RI1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NR1H4Q96RI1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.66■■□□□ 1.06
NR1H4Q96RI1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.66■■□□□ 1.06
NR1H4Q96RI1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NR1H4Q96RI1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NR1H4Q96RI1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.66■■□□□ 1.06
NR1H4Q96RI1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.66■■□□□ 1.06
NR1H4Q96RI1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NR1H4Q96RI1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NR1H4Q96RI1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NR1H4Q96RI1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.66■■□□□ 1.06
NR1H4Q96RI1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NR1H4Q96RI1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NR1H4Q96RI1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NR1H4Q96RI1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
NR1H4Q96RI1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NR1H4Q96RI1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NR1H4Q96RI1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.65■■□□□ 1.06
NR1H4Q96RI1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.65■■□□□ 1.06
NR1H4Q96RI1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
NR1H4Q96RI1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.64■■□□□ 1.05
NR1H4Q96RI1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NR1H4Q96RI1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NR1H4Q96RI1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NR1H4Q96RI1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
NR1H4Q96RI1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NR1H4Q96RI1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H4Q96RI1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H4Q96RI1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NR1H4Q96RI1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H4Q96RI1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H4Q96RI1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.63■■□□□ 1.05
NR1H4Q96RI1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H4Q96RI1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.63■■□□□ 1.05
NR1H4Q96RI1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H4Q96RI1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H4Q96RI1 AC108673.1-201ENST00000510422 1159 ntBASIC21.63■■□□□ 1.05
NR1H4Q96RI1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.63■■□□□ 1.05
NR1H4Q96RI1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NR1H4Q96RI1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
NR1H4Q96RI1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H4Q96RI1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms