Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
TMEM40Q8WWA1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TMEM40Q8WWA1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.39■■□□□ 1.66
TMEM40Q8WWA1 MIR6089-201ENST00000616698 64 ntBASIC25.39■■□□□ 1.66
TMEM40Q8WWA1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.38■■□□□ 1.65
TMEM40Q8WWA1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TMEM40Q8WWA1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TMEM40Q8WWA1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.38■■□□□ 1.65
TMEM40Q8WWA1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TMEM40Q8WWA1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TMEM40Q8WWA1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TMEM40Q8WWA1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
TMEM40Q8WWA1 MIR935-201ENST00000401179 91 ntBASIC25.37■■□□□ 1.65
TMEM40Q8WWA1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
TMEM40Q8WWA1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.37■■□□□ 1.65
TMEM40Q8WWA1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
TMEM40Q8WWA1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
TMEM40Q8WWA1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.36■■□□□ 1.65
TMEM40Q8WWA1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TMEM40Q8WWA1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TMEM40Q8WWA1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.36■■□□□ 1.65
TMEM40Q8WWA1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TMEM40Q8WWA1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
TMEM40Q8WWA1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TMEM40Q8WWA1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
TMEM40Q8WWA1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM40Q8WWA1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM40Q8WWA1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM40Q8WWA1 AC005837.3-201ENST00000612163 286 ntBASIC25.34■■□□□ 1.65
TMEM40Q8WWA1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM40Q8WWA1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
TMEM40Q8WWA1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM40Q8WWA1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.34■■□□□ 1.65
TMEM40Q8WWA1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TMEM40Q8WWA1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TMEM40Q8WWA1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TMEM40Q8WWA1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TMEM40Q8WWA1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.33■■□□□ 1.65
TMEM40Q8WWA1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.33■■□□□ 1.65
TMEM40Q8WWA1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TMEM40Q8WWA1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TMEM40Q8WWA1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
TMEM40Q8WWA1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TMEM40Q8WWA1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.32■■□□□ 1.64
TMEM40Q8WWA1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
TMEM40Q8WWA1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.32■■□□□ 1.64
TMEM40Q8WWA1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.32■■□□□ 1.64
TMEM40Q8WWA1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
TMEM40Q8WWA1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TMEM40Q8WWA1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TMEM40Q8WWA1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TMEM40Q8WWA1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.3■■□□□ 1.64
TMEM40Q8WWA1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TMEM40Q8WWA1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
TMEM40Q8WWA1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.3■■□□□ 1.64
TMEM40Q8WWA1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TMEM40Q8WWA1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
TMEM40Q8WWA1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TMEM40Q8WWA1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.29■■□□□ 1.64
TMEM40Q8WWA1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.29■■□□□ 1.64
TMEM40Q8WWA1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.29■■□□□ 1.64
TMEM40Q8WWA1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM40Q8WWA1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM40Q8WWA1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.28■■□□□ 1.64
TMEM40Q8WWA1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM40Q8WWA1 AC133561.4-201ENST00000566112 224 ntBASIC25.28■■□□□ 1.64
TMEM40Q8WWA1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM40Q8WWA1 AC005703.6-201ENST00000623265 1329 ntBASIC25.28■■□□□ 1.64
TMEM40Q8WWA1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM40Q8WWA1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM40Q8WWA1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
TMEM40Q8WWA1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
TMEM40Q8WWA1 AC106739.1-201ENST00000617035 715 ntBASIC25.27■■□□□ 1.64
TMEM40Q8WWA1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.27■■□□□ 1.64
TMEM40Q8WWA1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.27■■□□□ 1.64
TMEM40Q8WWA1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.26■■□□□ 1.63
TMEM40Q8WWA1 UNC93B3-201ENST00000308076 687 ntBASIC25.26■■□□□ 1.63
TMEM40Q8WWA1 PBX2P1-201ENST00000493219 1291 ntBASIC25.26■■□□□ 1.63
TMEM40Q8WWA1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
TMEM40Q8WWA1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TMEM40Q8WWA1 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.26■■□□□ 1.63
TMEM40Q8WWA1 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.26■■□□□ 1.63
TMEM40Q8WWA1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMEM40Q8WWA1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMEM40Q8WWA1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TMEM40Q8WWA1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
TMEM40Q8WWA1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.25■■□□□ 1.63
TMEM40Q8WWA1 SRD5A1P1-201ENST00000442297 786 ntBASIC25.25■■□□□ 1.63
TMEM40Q8WWA1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.25■■□□□ 1.63
TMEM40Q8WWA1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TMEM40Q8WWA1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
TMEM40Q8WWA1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.25■■□□□ 1.63
TMEM40Q8WWA1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMEM40Q8WWA1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMEM40Q8WWA1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
TMEM40Q8WWA1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.24■■□□□ 1.63
TMEM40Q8WWA1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.24■■□□□ 1.63
TMEM40Q8WWA1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.24■■□□□ 1.63
TMEM40Q8WWA1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMEM40Q8WWA1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms