Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SNED1Q8TER0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.52■■■□□ 2.16
SNED1Q8TER0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.52■■■□□ 2.16
SNED1Q8TER0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
SNED1Q8TER0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC28.52■■■□□ 2.16
SNED1Q8TER0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SNED1Q8TER0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.52■■■□□ 2.16
SNED1Q8TER0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
SNED1Q8TER0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SNED1Q8TER0 RASA4CP-201ENST00000424092 1398 ntBASIC28.52■■■□□ 2.16
SNED1Q8TER0 AC097639.1-201ENST00000565519 1891 ntBASIC28.51■■■□□ 2.15
SNED1Q8TER0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SNED1Q8TER0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SNED1Q8TER0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
SNED1Q8TER0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
SNED1Q8TER0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC28.51■■■□□ 2.15
SNED1Q8TER0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SNED1Q8TER0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
SNED1Q8TER0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SNED1Q8TER0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
SNED1Q8TER0 AC005703.6-201ENST00000623265 1329 ntBASIC28.5■■■□□ 2.15
SNED1Q8TER0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC28.5■■■□□ 2.15
SNED1Q8TER0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC28.5■■■□□ 2.15
SNED1Q8TER0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC28.5■■■□□ 2.15
SNED1Q8TER0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SNED1Q8TER0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
SNED1Q8TER0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SNED1Q8TER0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SNED1Q8TER0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC28.49■■■□□ 2.15
SNED1Q8TER0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC28.49■■■□□ 2.15
SNED1Q8TER0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SNED1Q8TER0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.49■■■□□ 2.15
SNED1Q8TER0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SNED1Q8TER0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
SNED1Q8TER0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.48■■■□□ 2.15
SNED1Q8TER0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SNED1Q8TER0 AC027682.1-201ENST00000562846 899 ntBASIC28.48■■■□□ 2.15
SNED1Q8TER0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SNED1Q8TER0 AC131274.2-201ENST00000580697 1507 ntBASIC28.48■■■□□ 2.15
SNED1Q8TER0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
SNED1Q8TER0 ERN1-208ENST00000606895 2068 ntBASIC28.47■■■□□ 2.15
SNED1Q8TER0 SYT6-210ENST00000641643 1587 ntBASIC28.47■■■□□ 2.15
SNED1Q8TER0 PTCHD3P2-201ENST00000424937 1205 ntBASIC28.47■■■□□ 2.15
SNED1Q8TER0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC28.47■■■□□ 2.15
SNED1Q8TER0 AC011298.3-201ENST00000615796 283 ntBASIC28.47■■■□□ 2.15
SNED1Q8TER0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.47■■■□□ 2.15
SNED1Q8TER0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
SNED1Q8TER0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC28.47■■■□□ 2.15
SNED1Q8TER0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.47■■■□□ 2.15
SNED1Q8TER0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNED1Q8TER0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
SNED1Q8TER0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNED1Q8TER0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
SNED1Q8TER0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNED1Q8TER0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNED1Q8TER0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNED1Q8TER0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNED1Q8TER0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
SNED1Q8TER0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNED1Q8TER0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
SNED1Q8TER0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.45■■■□□ 2.15
SNED1Q8TER0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SNED1Q8TER0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.45■■■□□ 2.14
SNED1Q8TER0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
SNED1Q8TER0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SNED1Q8TER0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SNED1Q8TER0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SNED1Q8TER0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SNED1Q8TER0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC28.43■■■□□ 2.14
SNED1Q8TER0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.43■■■□□ 2.14
SNED1Q8TER0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
SNED1Q8TER0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC28.43■■■□□ 2.14
SNED1Q8TER0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC28.43■■■□□ 2.14
SNED1Q8TER0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SNED1Q8TER0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
SNED1Q8TER0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
SNED1Q8TER0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SNED1Q8TER0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.42■■■□□ 2.14
SNED1Q8TER0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SNED1Q8TER0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC28.42■■■□□ 2.14
SNED1Q8TER0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC28.42■■■□□ 2.14
SNED1Q8TER0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC28.42■■■□□ 2.14
SNED1Q8TER0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SNED1Q8TER0 AL138724.1-201ENST00000606771 1088 ntBASIC28.41■■■□□ 2.14
SNED1Q8TER0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SNED1Q8TER0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SNED1Q8TER0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
SNED1Q8TER0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
SNED1Q8TER0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
SNED1Q8TER0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SNED1Q8TER0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
SNED1Q8TER0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SNED1Q8TER0 AC092171.4-201ENST00000609130 632 ntBASIC28.4■■■□□ 2.14
SNED1Q8TER0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SNED1Q8TER0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SNED1Q8TER0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC28.39■■■□□ 2.14
SNED1Q8TER0 AC099791.2-201ENST00000605725 427 ntBASIC28.39■■■□□ 2.14
SNED1Q8TER0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.39■■■□□ 2.14
SNED1Q8TER0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.39■■■□□ 2.13
SNED1Q8TER0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms