Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SMC5Q8IY18 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.74■■■□□ 2.19
SMC5Q8IY18 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
SMC5Q8IY18 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SMC5Q8IY18 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SMC5Q8IY18 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC28.74■■■□□ 2.19
SMC5Q8IY18 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
SMC5Q8IY18 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SMC5Q8IY18 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SMC5Q8IY18 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC28.74■■■□□ 2.19
SMC5Q8IY18 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC28.73■■■□□ 2.19
SMC5Q8IY18 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SMC5Q8IY18 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SMC5Q8IY18 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC28.73■■■□□ 2.19
SMC5Q8IY18 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SMC5Q8IY18 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC28.73■■■□□ 2.19
SMC5Q8IY18 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SMC5Q8IY18 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.73■■■□□ 2.19
SMC5Q8IY18 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
SMC5Q8IY18 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SMC5Q8IY18 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SMC5Q8IY18 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SMC5Q8IY18 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
SMC5Q8IY18 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SMC5Q8IY18 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC28.72■■■□□ 2.19
SMC5Q8IY18 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SMC5Q8IY18 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SMC5Q8IY18 MTX2-204ENST00000443241 799 ntTSL 3 BASIC28.72■■■□□ 2.19
SMC5Q8IY18 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.72■■■□□ 2.19
SMC5Q8IY18 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.72■■■□□ 2.19
SMC5Q8IY18 AC011551.1-201ENST00000614101 683 ntBASIC28.72■■■□□ 2.19
SMC5Q8IY18 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SMC5Q8IY18 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SMC5Q8IY18 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SMC5Q8IY18 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
SMC5Q8IY18 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
SMC5Q8IY18 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SMC5Q8IY18 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SMC5Q8IY18 AC004987.1-201ENST00000428627 508 ntBASIC28.71■■■□□ 2.19
SMC5Q8IY18 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SMC5Q8IY18 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SMC5Q8IY18 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SMC5Q8IY18 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC28.71■■■□□ 2.19
SMC5Q8IY18 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
SMC5Q8IY18 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SMC5Q8IY18 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SMC5Q8IY18 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
SMC5Q8IY18 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SMC5Q8IY18 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SMC5Q8IY18 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SMC5Q8IY18 AL161729.1-201ENST00000604104 1402 ntBASIC28.69■■■□□ 2.18
SMC5Q8IY18 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
SMC5Q8IY18 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SMC5Q8IY18 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SMC5Q8IY18 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.69■■■□□ 2.18
SMC5Q8IY18 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SMC5Q8IY18 ATP5G2P3-201ENST00000429083 425 ntBASIC28.69■■■□□ 2.18
SMC5Q8IY18 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
SMC5Q8IY18 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.69■■■□□ 2.18
SMC5Q8IY18 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
SMC5Q8IY18 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SMC5Q8IY18 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
SMC5Q8IY18 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
SMC5Q8IY18 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC28.68■■■□□ 2.18
SMC5Q8IY18 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC28.68■■■□□ 2.18
SMC5Q8IY18 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
SMC5Q8IY18 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SMC5Q8IY18 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
SMC5Q8IY18 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SMC5Q8IY18 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.68■■■□□ 2.18
SMC5Q8IY18 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SMC5Q8IY18 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMC5Q8IY18 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC28.67■■■□□ 2.18
SMC5Q8IY18 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SMC5Q8IY18 AC022616.5-201ENST00000518796 181 ntBASIC28.67■■■□□ 2.18
SMC5Q8IY18 PVT1_1.1-201ENST00000615125 194 ntBASIC28.67■■■□□ 2.18
SMC5Q8IY18 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.66■■■□□ 2.18
SMC5Q8IY18 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
SMC5Q8IY18 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SMC5Q8IY18 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
SMC5Q8IY18 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC28.66■■■□□ 2.18
SMC5Q8IY18 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMC5Q8IY18 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SMC5Q8IY18 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC28.66■■■□□ 2.18
SMC5Q8IY18 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMC5Q8IY18 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMC5Q8IY18 DUSP8P5-201ENST00000422884 1815 ntBASIC28.65■■■□□ 2.18
SMC5Q8IY18 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMC5Q8IY18 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.65■■■□□ 2.18
SMC5Q8IY18 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMC5Q8IY18 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SMC5Q8IY18 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
SMC5Q8IY18 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMC5Q8IY18 AC139795.1-202ENST00000500444 432 ntBASIC28.64■■■□□ 2.18
SMC5Q8IY18 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.64■■■□□ 2.18
SMC5Q8IY18 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SMC5Q8IY18 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMC5Q8IY18 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC28.64■■■□□ 2.18
SMC5Q8IY18 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
SMC5Q8IY18 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms