Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.88■■□□□ 1.73
CCDC60Q8IWA6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCDC60Q8IWA6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CCDC60Q8IWA6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.87■■□□□ 1.73
CCDC60Q8IWA6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
CCDC60Q8IWA6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.87■■□□□ 1.73
CCDC60Q8IWA6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.87■■□□□ 1.73
CCDC60Q8IWA6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
CCDC60Q8IWA6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CCDC60Q8IWA6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.86■■□□□ 1.73
CCDC60Q8IWA6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC60Q8IWA6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC60Q8IWA6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC60Q8IWA6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC60Q8IWA6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC60Q8IWA6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC60Q8IWA6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC60Q8IWA6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
CCDC60Q8IWA6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC60Q8IWA6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC60Q8IWA6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC60Q8IWA6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC60Q8IWA6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC60Q8IWA6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.85■■□□□ 1.73
CCDC60Q8IWA6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC60Q8IWA6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC60Q8IWA6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
CCDC60Q8IWA6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
CCDC60Q8IWA6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC60Q8IWA6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC60Q8IWA6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC60Q8IWA6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC60Q8IWA6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC60Q8IWA6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC60Q8IWA6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC60Q8IWA6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC60Q8IWA6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC60Q8IWA6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
CCDC60Q8IWA6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC60Q8IWA6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.83■■□□□ 1.73
CCDC60Q8IWA6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.83■■□□□ 1.73
CCDC60Q8IWA6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.83■■□□□ 1.72
CCDC60Q8IWA6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.82■■□□□ 1.72
CCDC60Q8IWA6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.82■■□□□ 1.72
CCDC60Q8IWA6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
CCDC60Q8IWA6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.82■■□□□ 1.72
CCDC60Q8IWA6 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.82■■□□□ 1.72
CCDC60Q8IWA6 AL356740.2-201ENST00000601559 647 ntBASIC25.82■■□□□ 1.72
CCDC60Q8IWA6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.82■■□□□ 1.72
CCDC60Q8IWA6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
CCDC60Q8IWA6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC60Q8IWA6 HLA-L-211ENST00000482052 1765 ntBASIC25.82■■□□□ 1.72
CCDC60Q8IWA6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC60Q8IWA6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.81■■□□□ 1.72
CCDC60Q8IWA6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC60Q8IWA6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC60Q8IWA6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.81■■□□□ 1.72
CCDC60Q8IWA6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC60Q8IWA6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC60Q8IWA6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.81■■□□□ 1.72
CCDC60Q8IWA6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.81■■□□□ 1.72
CCDC60Q8IWA6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC60Q8IWA6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
CCDC60Q8IWA6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC60Q8IWA6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC60Q8IWA6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC60Q8IWA6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC60Q8IWA6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC60Q8IWA6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC60Q8IWA6 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.8■■□□□ 1.72
CCDC60Q8IWA6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC60Q8IWA6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.8■■□□□ 1.72
CCDC60Q8IWA6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC60Q8IWA6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC60Q8IWA6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC60Q8IWA6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
CCDC60Q8IWA6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
CCDC60Q8IWA6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC60Q8IWA6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.79■■□□□ 1.72
CCDC60Q8IWA6 AL512631.2-201ENST00000604634 923 ntBASIC25.79■■□□□ 1.72
CCDC60Q8IWA6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC60Q8IWA6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC60Q8IWA6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC60Q8IWA6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC60Q8IWA6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.79■■□□□ 1.72
CCDC60Q8IWA6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC60Q8IWA6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC60Q8IWA6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC60Q8IWA6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC60Q8IWA6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC60Q8IWA6 MIR4466-201ENST00000606121 54 ntBASIC25.78■■□□□ 1.72
CCDC60Q8IWA6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.77■■□□□ 1.72
CCDC60Q8IWA6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.77■■□□□ 1.72
CCDC60Q8IWA6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.77■■□□□ 1.72
CCDC60Q8IWA6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
CCDC60Q8IWA6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC60Q8IWA6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
CCDC60Q8IWA6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC60Q8IWA6 AC020928.2-201ENST00000588717 2197 ntBASIC25.76■■□□□ 1.71
CCDC60Q8IWA6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms