Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD2Q8IV50 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD2Q8IV50 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD2Q8IV50 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD2Q8IV50 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD2Q8IV50 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LYSMD2Q8IV50 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD2Q8IV50 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD2Q8IV50 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LYSMD2Q8IV50 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.28■□□□□ 0.84
LYSMD2Q8IV50 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
LYSMD2Q8IV50 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD2Q8IV50 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.28■□□□□ 0.84
LYSMD2Q8IV50 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD2Q8IV50 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LYSMD2Q8IV50 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD2Q8IV50 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD2Q8IV50 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LYSMD2Q8IV50 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LYSMD2Q8IV50 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LYSMD2Q8IV50 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.27■□□□□ 0.84
LYSMD2Q8IV50 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.27■□□□□ 0.84
LYSMD2Q8IV50 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD2Q8IV50 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LYSMD2Q8IV50 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD2Q8IV50 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.26■□□□□ 0.83
LYSMD2Q8IV50 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD2Q8IV50 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD2Q8IV50 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD2Q8IV50 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD2Q8IV50 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD2Q8IV50 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
LYSMD2Q8IV50 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD2Q8IV50 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD2Q8IV50 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD2Q8IV50 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.25■□□□□ 0.83
LYSMD2Q8IV50 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.25■□□□□ 0.83
LYSMD2Q8IV50 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.25■□□□□ 0.83
LYSMD2Q8IV50 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.25■□□□□ 0.83
LYSMD2Q8IV50 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD2Q8IV50 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD2Q8IV50 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD2Q8IV50 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD2Q8IV50 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD2Q8IV50 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.24■□□□□ 0.83
LYSMD2Q8IV50 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD2Q8IV50 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
LYSMD2Q8IV50 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.24■□□□□ 0.83
LYSMD2Q8IV50 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.24■□□□□ 0.83
LYSMD2Q8IV50 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.24■□□□□ 0.83
LYSMD2Q8IV50 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD2Q8IV50 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD2Q8IV50 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD2Q8IV50 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LYSMD2Q8IV50 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.23■□□□□ 0.83
LYSMD2Q8IV50 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
LYSMD2Q8IV50 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.23■□□□□ 0.83
LYSMD2Q8IV50 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
LYSMD2Q8IV50 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD2Q8IV50 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD2Q8IV50 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD2Q8IV50 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
LYSMD2Q8IV50 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.22■□□□□ 0.83
LYSMD2Q8IV50 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD2Q8IV50 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD2Q8IV50 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.22■□□□□ 0.83
LYSMD2Q8IV50 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD2Q8IV50 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD2Q8IV50 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD2Q8IV50 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.22■□□□□ 0.83
LYSMD2Q8IV50 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LYSMD2Q8IV50 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD2Q8IV50 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD2Q8IV50 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD2Q8IV50 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD2Q8IV50 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.21■□□□□ 0.83
LYSMD2Q8IV50 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD2Q8IV50 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LYSMD2Q8IV50 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD2Q8IV50 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD2Q8IV50 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD2Q8IV50 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD2Q8IV50 AC087741.3-201ENST00000624270 1347 ntBASIC20.21■□□□□ 0.83
LYSMD2Q8IV50 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.21■□□□□ 0.83
LYSMD2Q8IV50 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LYSMD2Q8IV50 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.2■□□□□ 0.82
LYSMD2Q8IV50 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LYSMD2Q8IV50 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LYSMD2Q8IV50 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.2■□□□□ 0.82
LYSMD2Q8IV50 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LYSMD2Q8IV50 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LYSMD2Q8IV50 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.2■□□□□ 0.82
LYSMD2Q8IV50 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LYSMD2Q8IV50 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LYSMD2Q8IV50 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LYSMD2Q8IV50 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD2Q8IV50 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD2Q8IV50 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD2Q8IV50 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD2Q8IV50 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms