Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RAB11FIP1Q6WKZ4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RAB11FIP1Q6WKZ4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.27■■□□□ 1.32
RAB11FIP1Q6WKZ4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RAB11FIP1Q6WKZ4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.26■■□□□ 1.31
RAB11FIP1Q6WKZ4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.26■■□□□ 1.31
RAB11FIP1Q6WKZ4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.26■■□□□ 1.31
RAB11FIP1Q6WKZ4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.26■■□□□ 1.31
RAB11FIP1Q6WKZ4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.26■■□□□ 1.31
RAB11FIP1Q6WKZ4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.26■■□□□ 1.31
RAB11FIP1Q6WKZ4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAB11FIP1Q6WKZ4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RAB11FIP1Q6WKZ4 MIR4466-201ENST00000606121 54 ntBASIC23.25■■□□□ 1.31
RAB11FIP1Q6WKZ4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAB11FIP1Q6WKZ4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.25■■□□□ 1.31
RAB11FIP1Q6WKZ4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RAB11FIP1Q6WKZ4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.25■■□□□ 1.31
RAB11FIP1Q6WKZ4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.24■■□□□ 1.31
RAB11FIP1Q6WKZ4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.24■■□□□ 1.31
RAB11FIP1Q6WKZ4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAB11FIP1Q6WKZ4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.24■■□□□ 1.31
RAB11FIP1Q6WKZ4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAB11FIP1Q6WKZ4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.24■■□□□ 1.31
RAB11FIP1Q6WKZ4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAB11FIP1Q6WKZ4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RAB11FIP1Q6WKZ4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RAB11FIP1Q6WKZ4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RAB11FIP1Q6WKZ4 AC004448.1-201ENST00000458332 883 ntBASIC23.23■■□□□ 1.31
RAB11FIP1Q6WKZ4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.23■■□□□ 1.31
RAB11FIP1Q6WKZ4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
RAB11FIP1Q6WKZ4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
RAB11FIP1Q6WKZ4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.22■■□□□ 1.31
RAB11FIP1Q6WKZ4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RAB11FIP1Q6WKZ4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.22■■□□□ 1.31
RAB11FIP1Q6WKZ4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAB11FIP1Q6WKZ4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAB11FIP1Q6WKZ4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
RAB11FIP1Q6WKZ4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.22■■□□□ 1.31
RAB11FIP1Q6WKZ4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RAB11FIP1Q6WKZ4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.22■■□□□ 1.31
RAB11FIP1Q6WKZ4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RAB11FIP1Q6WKZ4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAB11FIP1Q6WKZ4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
RAB11FIP1Q6WKZ4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.22■■□□□ 1.31
RAB11FIP1Q6WKZ4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.22■■□□□ 1.31
RAB11FIP1Q6WKZ4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RAB11FIP1Q6WKZ4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.21■■□□□ 1.31
RAB11FIP1Q6WKZ4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RAB11FIP1Q6WKZ4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAB11FIP1Q6WKZ4 AL512631.2-201ENST00000604634 923 ntBASIC23.21■■□□□ 1.31
RAB11FIP1Q6WKZ4 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.21■■□□□ 1.31
RAB11FIP1Q6WKZ4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAB11FIP1Q6WKZ4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAB11FIP1Q6WKZ4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.2■■□□□ 1.3
RAB11FIP1Q6WKZ4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAB11FIP1Q6WKZ4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.2■■□□□ 1.3
RAB11FIP1Q6WKZ4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.2■■□□□ 1.3
RAB11FIP1Q6WKZ4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.2■■□□□ 1.3
RAB11FIP1Q6WKZ4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.2■■□□□ 1.3
RAB11FIP1Q6WKZ4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB11FIP1Q6WKZ4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB11FIP1Q6WKZ4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RAB11FIP1Q6WKZ4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RAB11FIP1Q6WKZ4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
RAB11FIP1Q6WKZ4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB11FIP1Q6WKZ4 MIR6089-201ENST00000616698 64 ntBASIC23.19■■□□□ 1.3
RAB11FIP1Q6WKZ4 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.19■■□□□ 1.3
RAB11FIP1Q6WKZ4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.19■■□□□ 1.3
RAB11FIP1Q6WKZ4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP1Q6WKZ4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP1Q6WKZ4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP1Q6WKZ4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP1Q6WKZ4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
RAB11FIP1Q6WKZ4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
RAB11FIP1Q6WKZ4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
RAB11FIP1Q6WKZ4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.18■■□□□ 1.3
RAB11FIP1Q6WKZ4 AL139246.5-201ENST00000606645 996 ntBASIC23.18■■□□□ 1.3
RAB11FIP1Q6WKZ4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.18■■□□□ 1.3
RAB11FIP1Q6WKZ4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP1Q6WKZ4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
RAB11FIP1Q6WKZ4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB11FIP1Q6WKZ4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.17■■□□□ 1.3
RAB11FIP1Q6WKZ4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
RAB11FIP1Q6WKZ4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
RAB11FIP1Q6WKZ4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP1Q6WKZ4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP1Q6WKZ4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP1Q6WKZ4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP1Q6WKZ4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP1Q6WKZ4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP1Q6WKZ4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RAB11FIP1Q6WKZ4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB11FIP1Q6WKZ4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB11FIP1Q6WKZ4 AC131274.2-201ENST00000580697 1507 ntBASIC23.15■■□□□ 1.3
RAB11FIP1Q6WKZ4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAB11FIP1Q6WKZ4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB11FIP1Q6WKZ4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAB11FIP1Q6WKZ4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAB11FIP1Q6WKZ4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.15■■□□□ 1.3
RAB11FIP1Q6WKZ4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms