Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 DUX4L2-201ENST00000561772 1275 ntBASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 AC136469.2-201ENST00000623944 1028 ntBASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 DUX4L6-201ENST00000626483 1275 ntBASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 DUX4L1-201ENST00000627662 1275 ntBASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 DUX4L8-201ENST00000629013 1275 ntBASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 DUX4L3-201ENST00000630187 1275 ntBASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 DUX4L7-201ENST00000630678 1275 ntBASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 DUX4L5-201ENST00000630834 1275 ntBASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PTCRAQ6ISU1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PTCRAQ6ISU1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PTCRAQ6ISU1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
PTCRAQ6ISU1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PTCRAQ6ISU1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PTCRAQ6ISU1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.2■■□□□ 1.46
PTCRAQ6ISU1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.2■■□□□ 1.46
PTCRAQ6ISU1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.2■■□□□ 1.46
PTCRAQ6ISU1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PTCRAQ6ISU1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PTCRAQ6ISU1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCRAQ6ISU1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCRAQ6ISU1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.19■■□□□ 1.46
PTCRAQ6ISU1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.19■■□□□ 1.46
PTCRAQ6ISU1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCRAQ6ISU1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCRAQ6ISU1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.19■■□□□ 1.46
PTCRAQ6ISU1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PTCRAQ6ISU1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCRAQ6ISU1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCRAQ6ISU1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCRAQ6ISU1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCRAQ6ISU1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.17■■□□□ 1.46
PTCRAQ6ISU1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PTCRAQ6ISU1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PTCRAQ6ISU1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
PTCRAQ6ISU1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.17■■□□□ 1.46
PTCRAQ6ISU1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.17■■□□□ 1.46
PTCRAQ6ISU1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PTCRAQ6ISU1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
PTCRAQ6ISU1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PTCRAQ6ISU1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PTCRAQ6ISU1 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.16■■□□□ 1.46
PTCRAQ6ISU1 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.16■■□□□ 1.46
PTCRAQ6ISU1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PTCRAQ6ISU1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PTCRAQ6ISU1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.16■■□□□ 1.46
PTCRAQ6ISU1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PTCRAQ6ISU1 BX842568.3-201ENST00000418104 571 ntBASIC24.16■■□□□ 1.46
PTCRAQ6ISU1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PTCRAQ6ISU1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.16■■□□□ 1.46
PTCRAQ6ISU1 ABCB10P1-201ENST00000614297 2181 ntBASIC24.15■■□□□ 1.46
PTCRAQ6ISU1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCRAQ6ISU1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PTCRAQ6ISU1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PTCRAQ6ISU1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
PTCRAQ6ISU1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PTCRAQ6ISU1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.15■■□□□ 1.46
PTCRAQ6ISU1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCRAQ6ISU1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PTCRAQ6ISU1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
PTCRAQ6ISU1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.46
PTCRAQ6ISU1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PTCRAQ6ISU1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PTCRAQ6ISU1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.14■■□□□ 1.45
PTCRAQ6ISU1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.14■■□□□ 1.45
PTCRAQ6ISU1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PTCRAQ6ISU1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PTCRAQ6ISU1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
PTCRAQ6ISU1 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.13■■□□□ 1.45
PTCRAQ6ISU1 HLA-L-209ENST00000420110 1011 ntBASIC24.13■■□□□ 1.45
PTCRAQ6ISU1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
PTCRAQ6ISU1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PTCRAQ6ISU1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.13■■□□□ 1.45
PTCRAQ6ISU1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.13■■□□□ 1.45
PTCRAQ6ISU1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PTCRAQ6ISU1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PTCRAQ6ISU1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.12■■□□□ 1.45
PTCRAQ6ISU1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCRAQ6ISU1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PTCRAQ6ISU1 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.12■■□□□ 1.45
PTCRAQ6ISU1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.12■■□□□ 1.45
PTCRAQ6ISU1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCRAQ6ISU1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
PTCRAQ6ISU1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCRAQ6ISU1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PTCRAQ6ISU1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PTCRAQ6ISU1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PTCRAQ6ISU1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PTCRAQ6ISU1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.11■■□□□ 1.45
PTCRAQ6ISU1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.11■■□□□ 1.45
PTCRAQ6ISU1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms