Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LPCAT4Q643R3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
LPCAT4Q643R3 DUX4L28-201ENST00000623687 678 ntBASIC21.79■■□□□ 1.08
LPCAT4Q643R3 AL137060.1-201ENST00000618151 2648 ntBASIC21.79■■□□□ 1.08
LPCAT4Q643R3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LPCAT4Q643R3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LPCAT4Q643R3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LPCAT4Q643R3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.78■■□□□ 1.08
LPCAT4Q643R3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LPCAT4Q643R3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LPCAT4Q643R3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
LPCAT4Q643R3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
LPCAT4Q643R3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LPCAT4Q643R3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.78■■□□□ 1.08
LPCAT4Q643R3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LPCAT4Q643R3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LPCAT4Q643R3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LPCAT4Q643R3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
LPCAT4Q643R3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.07
LPCAT4Q643R3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LPCAT4Q643R3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.76■■□□□ 1.07
LPCAT4Q643R3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.76■■□□□ 1.07
LPCAT4Q643R3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LPCAT4Q643R3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
LPCAT4Q643R3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.76■■□□□ 1.07
LPCAT4Q643R3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.76■■□□□ 1.07
LPCAT4Q643R3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LPCAT4Q643R3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LPCAT4Q643R3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LPCAT4Q643R3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
LPCAT4Q643R3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
LPCAT4Q643R3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LPCAT4Q643R3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LPCAT4Q643R3 ECEL1P1-201ENST00000373592 1742 ntBASIC21.75■■□□□ 1.07
LPCAT4Q643R3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LPCAT4Q643R3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.75■■□□□ 1.07
LPCAT4Q643R3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LPCAT4Q643R3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
LPCAT4Q643R3 SLC25A24-204ENST00000569674 2357 ntBASIC21.75■■□□□ 1.07
LPCAT4Q643R3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LPCAT4Q643R3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LPCAT4Q643R3 ANOS2P-203ENST00000472227 1816 ntBASIC21.74■■□□□ 1.07
LPCAT4Q643R3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LPCAT4Q643R3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.74■■□□□ 1.07
LPCAT4Q643R3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LPCAT4Q643R3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LPCAT4Q643R3 FOXO3B-201ENST00000395675 1928 ntBASIC21.73■■□□□ 1.07
LPCAT4Q643R3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LPCAT4Q643R3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.73■■□□□ 1.07
LPCAT4Q643R3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LPCAT4Q643R3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LPCAT4Q643R3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
LPCAT4Q643R3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LPCAT4Q643R3 AL359258.2-201ENST00000564063 1566 ntBASIC21.73■■□□□ 1.07
LPCAT4Q643R3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LPCAT4Q643R3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LPCAT4Q643R3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LPCAT4Q643R3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LPCAT4Q643R3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.72■■□□□ 1.07
LPCAT4Q643R3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT4Q643R3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT4Q643R3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT4Q643R3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT4Q643R3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT4Q643R3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT4Q643R3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LPCAT4Q643R3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT4Q643R3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT4Q643R3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.72■■□□□ 1.07
LPCAT4Q643R3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT4Q643R3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT4Q643R3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
LPCAT4Q643R3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT4Q643R3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
LPCAT4Q643R3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT4Q643R3 MIR3665-201ENST00000578708 105 ntBASIC21.71■■□□□ 1.07
LPCAT4Q643R3 DUSP8P3-201ENST00000399571 1760 ntBASIC21.71■■□□□ 1.07
LPCAT4Q643R3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT4Q643R3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT4Q643R3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT4Q643R3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
LPCAT4Q643R3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LPCAT4Q643R3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
LPCAT4Q643R3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LPCAT4Q643R3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.69■■□□□ 1.06
LPCAT4Q643R3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LPCAT4Q643R3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LPCAT4Q643R3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LPCAT4Q643R3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LPCAT4Q643R3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LPCAT4Q643R3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LPCAT4Q643R3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.68■■□□□ 1.06
LPCAT4Q643R3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LPCAT4Q643R3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LPCAT4Q643R3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LPCAT4Q643R3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LPCAT4Q643R3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LPCAT4Q643R3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
LPCAT4Q643R3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
LPCAT4Q643R3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms