Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.83■■□□□ 1.89
COL13A1Q5TAT6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC26.83■■□□□ 1.89
COL13A1Q5TAT6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.83■■□□□ 1.89
COL13A1Q5TAT6 AC142086.2-201ENST00000569753 217 ntBASIC26.83■■□□□ 1.89
COL13A1Q5TAT6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC26.83■■□□□ 1.89
COL13A1Q5TAT6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
COL13A1Q5TAT6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL13A1Q5TAT6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL13A1Q5TAT6 GPX1P1-201ENST00000388829 606 ntBASIC26.82■■□□□ 1.88
COL13A1Q5TAT6 AC016769.1-201ENST00000409132 1010 ntBASIC26.82■■□□□ 1.88
COL13A1Q5TAT6 TERF1P2-201ENST00000583350 1212 ntBASIC26.82■■□□□ 1.88
COL13A1Q5TAT6 GAS2L1P2-201ENST00000436355 1356 ntBASIC26.82■■□□□ 1.88
COL13A1Q5TAT6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL13A1Q5TAT6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
COL13A1Q5TAT6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.81■■□□□ 1.88
COL13A1Q5TAT6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL13A1Q5TAT6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL13A1Q5TAT6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL13A1Q5TAT6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC26.81■■□□□ 1.88
COL13A1Q5TAT6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL13A1Q5TAT6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.81■■□□□ 1.88
COL13A1Q5TAT6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL13A1Q5TAT6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL13A1Q5TAT6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
COL13A1Q5TAT6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL13A1Q5TAT6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
COL13A1Q5TAT6 TSPY26P-201ENST00000476365 1326 ntBASIC26.8■■□□□ 1.88
COL13A1Q5TAT6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.8■■□□□ 1.88
COL13A1Q5TAT6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.79■■□□□ 1.88
COL13A1Q5TAT6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
COL13A1Q5TAT6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
COL13A1Q5TAT6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC26.79■■□□□ 1.88
COL13A1Q5TAT6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL13A1Q5TAT6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.79■■□□□ 1.88
COL13A1Q5TAT6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.78■■□□□ 1.88
COL13A1Q5TAT6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
COL13A1Q5TAT6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
COL13A1Q5TAT6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
COL13A1Q5TAT6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
COL13A1Q5TAT6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL13A1Q5TAT6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.77■■□□□ 1.88
COL13A1Q5TAT6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL13A1Q5TAT6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.77■■□□□ 1.88
COL13A1Q5TAT6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.77■■□□□ 1.88
COL13A1Q5TAT6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
COL13A1Q5TAT6 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.76■■□□□ 1.87
COL13A1Q5TAT6 AC137761.2-201ENST00000561729 223 ntBASIC26.76■■□□□ 1.87
COL13A1Q5TAT6 AC145350.3-201ENST00000569033 163 ntBASIC26.76■■□□□ 1.87
COL13A1Q5TAT6 AC126544.1-201ENST00000580842 1059 ntBASIC26.76■■□□□ 1.87
COL13A1Q5TAT6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
COL13A1Q5TAT6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
COL13A1Q5TAT6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
COL13A1Q5TAT6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.75■■□□□ 1.87
COL13A1Q5TAT6 AC012414.1-201ENST00000556676 535 ntBASIC26.75■■□□□ 1.87
COL13A1Q5TAT6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
COL13A1Q5TAT6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
COL13A1Q5TAT6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL13A1Q5TAT6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COL13A1Q5TAT6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC26.74■■□□□ 1.87
COL13A1Q5TAT6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COL13A1Q5TAT6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26.74■■□□□ 1.87
COL13A1Q5TAT6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.73■■□□□ 1.87
COL13A1Q5TAT6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.73■■□□□ 1.87
COL13A1Q5TAT6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.73■■□□□ 1.87
COL13A1Q5TAT6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
COL13A1Q5TAT6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.73■■□□□ 1.87
COL13A1Q5TAT6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL13A1Q5TAT6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL13A1Q5TAT6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.72■■□□□ 1.87
COL13A1Q5TAT6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL13A1Q5TAT6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL13A1Q5TAT6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL13A1Q5TAT6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.71■■□□□ 1.87
COL13A1Q5TAT6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC26.71■■□□□ 1.87
COL13A1Q5TAT6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
COL13A1Q5TAT6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
COL13A1Q5TAT6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.71■■□□□ 1.87
COL13A1Q5TAT6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
COL13A1Q5TAT6 AL596275.1-201ENST00000423464 877 ntBASIC26.7■■□□□ 1.86
COL13A1Q5TAT6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL13A1Q5TAT6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL13A1Q5TAT6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL13A1Q5TAT6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL13A1Q5TAT6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
COL13A1Q5TAT6 MIR663A-201ENST00000385250 93 ntBASIC26.69■■□□□ 1.86
COL13A1Q5TAT6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
COL13A1Q5TAT6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
COL13A1Q5TAT6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.69■■□□□ 1.86
COL13A1Q5TAT6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.69■■□□□ 1.86
COL13A1Q5TAT6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.69■■□□□ 1.86
COL13A1Q5TAT6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL13A1Q5TAT6 BID-214ENST00000617586 542 ntTSL 5 BASIC26.69■■□□□ 1.86
COL13A1Q5TAT6 LINC02228-203ENST00000641970 1355 ntBASIC26.69■■□□□ 1.86
COL13A1Q5TAT6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
COL13A1Q5TAT6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL13A1Q5TAT6 RPS2P52-201ENST00000469610 820 ntBASIC26.68■■□□□ 1.86
COL13A1Q5TAT6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.68■■□□□ 1.86
COL13A1Q5TAT6 AC010331.1-201ENST00000611423 582 ntBASIC26.68■■□□□ 1.86
COL13A1Q5TAT6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
COL13A1Q5TAT6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms