Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.635e-9■■■■□ 21.7
SRSF1Q07955 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC10□□□□□ -0.815e-9■■■■□ 21.7
SRSF1Q07955 AKAP8-204ENST00000598597 3071 ntTSL 1 (best)9.95□□□□□ -0.824e-8■■■■□ 21.7
SRSF1Q07955 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.864e-8■■■■□ 21.7
SRSF1Q07955 LDLR-210ENST00000559340 605 ntTSL 58.25□□□□□ -1.091e-6■■■■□ 21.7
SRSF1Q07955 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.331e-10■■■■□ 21.7
SRSF1Q07955 NRIP1-207ENST00000638122 543 ntTSL 1 (best)11.28□□□□□ -0.61e-10■■■■□ 21.7
SRSF1Q07955 NRIP1-205ENST00000637630 573 ntTSL 311.26□□□□□ -0.611e-10■■■■□ 21.7
SRSF1Q07955 NRIP1-206ENST00000637963 498 ntTSL 410.81□□□□□ -0.681e-10■■■■□ 21.7
SRSF1Q07955 NRIP1-202ENST00000400199 7562 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.011e-10■■■■□ 21.7
SRSF1Q07955 ACSS2-216ENST00000484354 517 ntTSL 521.76■■□□□ 1.077e-8■■■■□ 21.6
SRSF1Q07955 ACSS2-205ENST00000467019 504 ntTSL 420.84■□□□□ 0.937e-8■■■■□ 21.6
SRSF1Q07955 ACSS2-208ENST00000473172 665 ntTSL 318.93■□□□□ 0.627e-8■■■■□ 21.6
SRSF1Q07955 ACSS2-222ENST00000493805 603 ntTSL 418.37■□□□□ 0.537e-8■■■■□ 21.6
SRSF1Q07955 ACSS2-209ENST00000475459 558 ntTSL 412.2□□□□□ -0.467e-8■■■■□ 21.6
SRSF1Q07955 ACSS2-215ENST00000481971 570 ntTSL 412.19□□□□□ -0.467e-8■■■■□ 21.6
SRSF1Q07955 ACSS2-212ENST00000480274 567 ntTSL 512.03□□□□□ -0.487e-8■■■■□ 21.6
SRSF1Q07955 ACSS2-217ENST00000488172 648 ntTSL 410.44□□□□□ -0.747e-8■■■■□ 21.6
SRSF1Q07955 ACSS2-224ENST00000497927 580 ntTSL 410.44□□□□□ -0.747e-8■■■■□ 21.6
SRSF1Q07955 ACSS2-218ENST00000490046 455 ntTSL 43.42□□□□□ -1.867e-8■■■■□ 21.6
SRSF1Q07955 ACSS2-203ENST00000461051 403 ntTSL 32.42□□□□□ -2.027e-8■■■■□ 21.6
SRSF1Q07955 SLTM-209ENST00000493062 987 ntTSL 210.47□□□□□ -0.735e-6■■■■□ 21.6
SRSF1Q07955 SLTM-222ENST00000560494 674 ntTSL 310.14□□□□□ -0.795e-6■■■■□ 21.6
SRSF1Q07955 SLTM-203ENST00000432750 2383 ntTSL 59.52□□□□□ -0.885e-6■■■■□ 21.6
SRSF1Q07955 SLTM-212ENST00000557924 3021 ntTSL 28.95□□□□□ -0.985e-6■■■■□ 21.6
SRSF1Q07955 SLTM-202ENST00000380516 4147 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.175e-6■■■■□ 21.6
SRSF1Q07955 SLTM-208ENST00000492526 3022 ntTSL 27.1□□□□□ -1.275e-6■■■■□ 21.6
SRSF1Q07955 SLTM-214ENST00000558052 806 ntTSL 25.97□□□□□ -1.455e-6■■■■□ 21.6
SRSF1Q07955 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.13■□□□□ 0.979e-11■■■■□ 21.6
SRSF1Q07955 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.1■□□□□ 0.819e-11■■■■□ 21.6
SRSF1Q07955 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.119e-11■■■■□ 21.6
SRSF1Q07955 MTMR14-205ENST00000416864 840 ntTSL 522.53■■□□□ 1.21e-6■■■■□ 21.6
SRSF1Q07955 MTMR14-210ENST00000447144 1664 ntTSL 220.35■□□□□ 0.851e-6■■■■□ 21.6
SRSF1Q07955 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.791e-6■■■■□ 21.6
SRSF1Q07955 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.451e-6■■■■□ 21.6
SRSF1Q07955 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.131e-6■■■■□ 21.6
SRSF1Q07955 MTMR14-207ENST00000430020 1451 ntTSL 215.65■□□□□ 0.11e-6■■■■□ 21.6
SRSF1Q07955 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.261e-6■■■■□ 21.6
SRSF1Q07955 LIG1-219ENST00000600055 602 ntTSL 214□□□□□ -0.178e-7■■■■□ 21.6
SRSF1Q07955 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.473e-9■■■■□ 21.6
SRSF1Q07955 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.53e-9■■■■□ 21.6
SRSF1Q07955 KIF18B-202ENST00000587309 4217 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.13e-9■■■■□ 21.6
SRSF1Q07955 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.47■□□□□ 0.073e-6■■■■□ 21.6
SRSF1Q07955 CARD10-204ENST00000433485 578 ntTSL 419.02■□□□□ 0.643e-7■■■■□ 21.5
SRSF1Q07955 CARD10-208ENST00000486118 546 ntTSL 417.8■□□□□ 0.443e-7■■■■□ 21.5
SRSF1Q07955 HELZ2-201ENST00000370082 1827 ntTSL 217.4■□□□□ 0.381e-6■■■■□ 21.5
SRSF1Q07955 CARD10-205ENST00000437756 2140 ntTSL 1 (best)15.99■□□□□ 0.153e-7■■■■□ 21.5
SRSF1Q07955 HELZ2-206ENST00000479540 3079 ntTSL 1 (best)13.16□□□□□ -0.31e-6■■■■□ 21.5
SRSF1Q07955 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.461e-6■■■■□ 21.5
SRSF1Q07955 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.02□□□□□ -0.643e-7■■■■□ 21.5
SRSF1Q07955 ZSWIM8-202ENST00000412198 3611 ntTSL 29.44□□□□□ -0.93e-7■■■■□ 21.5
SRSF1Q07955 ZSWIM8-222ENST00000604754 3369 ntTSL 1 (best)8.91□□□□□ -0.983e-7■■■■□ 21.5
SRSF1Q07955 KAT6B-206ENST00000490365 6532 ntTSL 27.45□□□□□ -1.223e-12■■■■□ 21.5
SRSF1Q07955 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.363e-12■■■■□ 21.5
SRSF1Q07955 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.393e-12■■■■□ 21.5
SRSF1Q07955 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.433e-12■■■■□ 21.5
SRSF1Q07955 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.463e-12■■■■□ 21.5
SRSF1Q07955 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.693e-12■■■■□ 21.5
SRSF1Q07955 ANKZF1-220ENST00000486203 993 ntTSL 214.5□□□□□ -0.097e-7■■■■□ 21.5
SRSF1Q07955 ANKZF1-207ENST00000447157 537 ntTSL 413.76□□□□□ -0.217e-7■■■■□ 21.5
SRSF1Q07955 ANKZF1-205ENST00000435521 576 ntTSL 412.66□□□□□ -0.383e-7■■■■□ 21.5
SRSF1Q07955 ANKZF1-208ENST00000453432 511 ntTSL 311.22□□□□□ -0.617e-7■■■■□ 21.5
SRSF1Q07955 ANKZF1-223ENST00000491181 623 ntTSL 37.6□□□□□ -1.197e-7■■■■□ 21.5
SRSF1Q07955 ANKZF1-217ENST00000475202 576 ntTSL 36.09□□□□□ -1.437e-7■■■■□ 21.5
SRSF1Q07955 ANKZF1-221ENST00000489580 570 ntTSL 25.93□□□□□ -1.467e-7■■■■□ 21.5
SRSF1Q07955 ANKZF1-224ENST00000493563 571 ntTSL 34.38□□□□□ -1.717e-7■■■■□ 21.5
SRSF1Q07955 C9orf3-208ENST00000451893 514 ntTSL 320.53■□□□□ 0.883e-10■■■■□ 21.5
SRSF1Q07955 C9orf3-222ENST00000496567 1575 ntTSL 519.14■□□□□ 0.653e-10■■■■□ 21.5
SRSF1Q07955 FTX-218ENST00000641360 3897 nt4.45□□□□□ -1.73e-12■■■■□ 21.4
SRSF1Q07955 CPSF6-205ENST00000550075 540 ntTSL 423.78■■□□□ 1.41e-6■■■■□ 21.4
SRSF1Q07955 CPOX-205ENST00000515041 1030 ntTSL 222.59■■□□□ 1.211e-6■■■■□ 21.4
SRSF1Q07955 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.111e-6■■■■□ 21.4
SRSF1Q07955 CPOX-204ENST00000513674 826 ntTSL 521.96■■□□□ 1.111e-6■■■■□ 21.4
SRSF1Q07955 ZFAND5-203ENST00000376956 690 ntTSL 519.64■□□□□ 0.731e-6■■■■□ 21.4
SRSF1Q07955 STK4-206ENST00000488618 932 ntTSL 1 (best)18.23■□□□□ 0.511e-6■■■■□ 21.4
SRSF1Q07955 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.461e-6■■■■□ 21.4
SRSF1Q07955 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.341e-6■■■■□ 21.4
SRSF1Q07955 CREB1-204ENST00000421139 713 ntTSL 516.26■□□□□ 0.191e-6■■■■□ 21.4
SRSF1Q07955 AHCTF1-205ENST00000478568 611 ntTSL 416.21■□□□□ 0.191e-8■■■■□ 21.4
SRSF1Q07955 ZFAND5-207ENST00000487330 631 ntTSL 216.08■□□□□ 0.161e-6■■■■□ 21.4
SRSF1Q07955 RIPOR3-206ENST00000488529 953 ntTSL 515.61■□□□□ 0.091e-6■■■■□ 21.4
SRSF1Q07955 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.21■□□□□ 0.021e-6■■■■□ 21.4
SRSF1Q07955 RIPOR3-205ENST00000482129 811 ntTSL 315.05■□□□□ -01e-6■■■■□ 21.4
SRSF1Q07955 IP6K2-203ENST00000412795 750 ntTSL 314.8□□□□□ -0.047e-9■■■■□ 21.4
SRSF1Q07955 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.5□□□□□ -0.091e-6■■■■□ 21.4
SRSF1Q07955 STK4-204ENST00000480745 549 ntTSL 514.43□□□□□ -0.11e-6■■■■□ 21.4
SRSF1Q07955 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.33□□□□□ -0.127e-9■■■■□ 21.4
SRSF1Q07955 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.71□□□□□ -0.217e-9■■■■□ 21.4
SRSF1Q07955 IP6K2-212ENST00000433104 2490 ntTSL 213.59□□□□□ -0.237e-9■■■■□ 21.4
SRSF1Q07955 PFKP-205ENST00000413079 496 ntTSL 312.9□□□□□ -0.341e-6■■■■□ 21.4
SRSF1Q07955 IP6K2-207ENST00000416707 1260 ntTSL 1 (best)12.86□□□□□ -0.357e-9■■■■□ 21.4
SRSF1Q07955 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.81□□□□□ -0.361e-6■■■■□ 21.4
SRSF1Q07955 IP6K2-220ENST00000449563 580 ntTSL 412.51□□□□□ -0.417e-9■■■■□ 21.4
SRSF1Q07955 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.421e-6■■■■□ 21.4
SRSF1Q07955 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC12.33□□□□□ -0.447e-9■■■■□ 21.4
SRSF1Q07955 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.471e-6■■■■□ 21.4
SRSF1Q07955 IP6K2-214ENST00000436134 631 ntTSL 311.88□□□□□ -0.517e-9■■■■□ 21.4
SRSF1Q07955 IP6K2-209ENST00000424035 568 ntTSL 411.88□□□□□ -0.517e-9■■■■□ 21.4
SRSF1Q07955 IP6K2-213ENST00000434860 560 ntTSL 411.73□□□□□ -0.537e-9■■■■□ 21.4
SRSF1Q07955 IP6K2-206ENST00000413654 553 ntTSL 411.73□□□□□ -0.537e-9■■■■□ 21.4
Retrieved 100 of 14,836 protein–RNA pairs in 202.9 ms