Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 ICT1YLR099C 1185 nt6.5□□□□□ -1.37 RIP-Chip
UBP3Q01477 YLR157W-EYLR157W-E 165 nt6.5□□□□□ -1.37
UBP3Q01477 CAF40YNL288W 1122 nt6.5□□□□□ -1.37
UBP3Q01477 RPL3YOR063W 1164 nt6.5□□□□□ -1.37
UBP3Q01477 YPL073CYPL073C 486 nt6.5□□□□□ -1.37
UBP3Q01477 PRP9YDL030W 1593 nt6.49□□□□□ -1.37
UBP3Q01477 UBP7YIL156W 3216 nt6.49□□□□□ -1.37
UBP3Q01477 YPK2YMR104C 2034 nt6.49□□□□□ -1.37
UBP3Q01477 TKL1YPR074C 2043 nt6.49□□□□□ -1.37 RIP-Chip
UBP3Q01477 YDR034W-BYDR034W-B 156 nt6.49□□□□□ -1.37
UBP3Q01477 YIL047C-AYIL047C-A 369 nt6.49□□□□□ -1.37
UBP3Q01477 ARG3YJL088W 1017 nt6.49□□□□□ -1.37
UBP3Q01477 MOG1YJR074W 657 nt6.49□□□□□ -1.37
UBP3Q01477 SNO1YMR095C 675 nt6.49□□□□□ -1.37
UBP3Q01477 MRPS16YPL013C 366 nt6.49□□□□□ -1.37
UBP3Q01477 MRL1YPR079W 1146 nt6.49□□□□□ -1.37
UBP3Q01477 BRL1YHR036W 1416 nt6.49□□□□□ -1.37
UBP3Q01477 YJR124CYJR124C 1347 nt6.49□□□□□ -1.37
UBP3Q01477 XBP1YIL101C 1944 nt6.48□□□□□ -1.37 RIP-Chip
UBP3Q01477 GEX1YCL073C 1848 nt6.48□□□□□ -1.37
UBP3Q01477 MUP3YHL036W 1641 nt6.48□□□□□ -1.37 RIP-Chip
UBP3Q01477 YDR249CYDR249C 1122 nt6.48□□□□□ -1.37 RIP-Chip
UBP3Q01477 GPI11YDR302W 660 nt6.48□□□□□ -1.37
UBP3Q01477 YEL068CYEL068C 333 nt6.48□□□□□ -1.37
UBP3Q01477 PDE1YGL248W 1110 nt6.48□□□□□ -1.37 RIP-Chip
UBP3Q01477 AIM23YJL131C 1071 nt6.48□□□□□ -1.37 RIP-Chip
UBP3Q01477 RPS31YLR167W 459 nt6.48□□□□□ -1.37 RIP-Chip
UBP3Q01477 TSA1YML028W 591 nt6.48□□□□□ -1.37
UBP3Q01477 YML083CYML083C 1257 nt6.48□□□□□ -1.37
UBP3Q01477 ARL3YPL051W 597 nt6.48□□□□□ -1.37
UBP3Q01477 YPR114WYPR114W 948 nt6.48□□□□□ -1.37
UBP3Q01477 YIL067CYIL067C 2037 nt6.48□□□□□ -1.37 RIP-Chip
UBP3Q01477 HOF1YMR032W 2010 nt6.48□□□□□ -1.37
UBP3Q01477 YDR387CYDR387C 1668 nt6.48□□□□□ -1.37
UBP3Q01477 UTP4YDR324C 2331 nt6.48□□□□□ -1.37 RIP-Chip
UBP3Q01477 LYS21YDL131W 1323 nt6.48□□□□□ -1.37
UBP3Q01477 TEP1YNL128W 1305 nt6.48□□□□□ -1.37
UBP3Q01477 STL1YDR536W 1710 nt6.47□□□□□ -1.37
UBP3Q01477 UBP9YER098W 2265 nt6.47□□□□□ -1.37
UBP3Q01477 CSC1YLR241W 2349 nt6.47□□□□□ -1.37
UBP3Q01477 YFT2YDR319C 825 nt6.47□□□□□ -1.37
UBP3Q01477 PPE1YHR075C 1203 nt6.47□□□□□ -1.37 RIP-Chip
UBP3Q01477 YJL047C-AYJL047C-A 135 nt6.47□□□□□ -1.37
UBP3Q01477 MRT4YKL009W 711 nt6.47□□□□□ -1.37
UBP3Q01477 MTR2YKL186C 555 nt6.47□□□□□ -1.37
UBP3Q01477 YLR118CYLR118C 684 nt6.47□□□□□ -1.37
UBP3Q01477 URA4YLR420W 1095 nt6.47□□□□□ -1.37 RIP-Chip
UBP3Q01477 YIF1YNL263C 945 nt6.47□□□□□ -1.37
UBP3Q01477 YSA1YBR111C 696 nt6.47□□□□□ -1.37 RIP-Chip
UBP3Q01477 HST3YOR025W 1344 nt6.47□□□□□ -1.37
UBP3Q01477 RGD1YBR260C 2001 nt6.47□□□□□ -1.37
UBP3Q01477 KKQ8YKL168C 2175 nt6.47□□□□□ -1.37 RIP-Chip
UBP3Q01477 SAC6YDR129C 1929 nt6.46□□□□□ -1.37 RIP-Chip
UBP3Q01477 CBP1YJL209W 1965 nt6.46□□□□□ -1.37
UBP3Q01477 YDL183CYDL183C 963 nt6.46□□□□□ -1.38
UBP3Q01477 BUD32YGR262C 786 nt6.46□□□□□ -1.38 RIP-Chip
UBP3Q01477 YHL017WYHL017W 1599 nt6.46□□□□□ -1.38
UBP3Q01477 SPO16YHR153C 597 nt6.46□□□□□ -1.38
UBP3Q01477 DAN1YJR150C 897 nt6.46□□□□□ -1.38
UBP3Q01477 RMD9YGL107C 1941 nt6.46□□□□□ -1.38 RIP-Chip
UBP3Q01477 DEG1YFL001W 1329 nt6.46□□□□□ -1.38
UBP3Q01477 RPS16BYDL083C 432 nt6.45□□□□□ -1.38 RIP-Chip
UBP3Q01477 YDR445CYDR445C 408 nt6.45□□□□□ -1.38
UBP3Q01477 SUT1YGL162W 900 nt6.45□□□□□ -1.38 RIP-Chip
UBP3Q01477 YAL064WYAL064W 285 nt6.45□□□□□ -1.38
UBP3Q01477 PRM9YAR031W 897 nt6.45□□□□□ -1.38
UBP3Q01477 YOL166CYOL166C 339 nt6.45□□□□□ -1.38
UBP3Q01477 IDI1YPL117C 867 nt6.45□□□□□ -1.38 RIP-Chip
UBP3Q01477 SKN1YGR143W 2316 nt6.44□□□□□ -1.38
UBP3Q01477 YDR029WYDR029W 315 nt6.44□□□□□ -1.38
UBP3Q01477 SCL1YGL011C 759 nt6.44□□□□□ -1.38
UBP3Q01477 PHB1YGR132C 864 nt6.44□□□□□ -1.38
UBP3Q01477 BCY1YIL033C 1251 nt6.44□□□□□ -1.38
UBP3Q01477 HYM1YKL189W 1200 nt6.44□□□□□ -1.38
UBP3Q01477 PAU17YLL025W 375 nt6.44□□□□□ -1.38
UBP3Q01477 SEC65YML105C 822 nt6.44□□□□□ -1.38
UBP3Q01477 LTO1YNL260C 597 nt6.44□□□□□ -1.38
UBP3Q01477 RPS28AYOR167C 204 nt6.44□□□□□ -1.38 RIP-Chip
UBP3Q01477 EFM2YBR271W 1260 nt6.44□□□□□ -1.38 RIP-Chip
UBP3Q01477 QNS1YHR074W 2145 nt6.44□□□□□ -1.38
UBP3Q01477 PRP24YMR268C 1335 nt6.44□□□□□ -1.38
UBP3Q01477 YOL036WYOL036W 2286 nt6.43□□□□□ -1.38
UBP3Q01477 GAS2YLR343W 1668 nt6.43□□□□□ -1.38
UBP3Q01477 OCA4YCR095C 1089 nt6.43□□□□□ -1.38
UBP3Q01477 BUD26YDR241W 288 nt6.43□□□□□ -1.38
UBP3Q01477 RPT3YDR394W 1287 nt6.43□□□□□ -1.38
UBP3Q01477 YIL028WYIL028W 399 nt6.43□□□□□ -1.38
UBP3Q01477 YLR365WYLR365W 333 nt6.43□□□□□ -1.38
UBP3Q01477 SPS18YNL204C 903 nt6.43□□□□□ -1.38
UBP3Q01477 YPR160C-AYPR160C-A 285 nt6.43□□□□□ -1.38
UBP3Q01477 snR3snR3 194 nt6.43□□□□□ -1.38
UBP3Q01477 IFM1YOL023W 2031 nt6.43□□□□□ -1.38
UBP3Q01477 ABD1YBR236C 1311 nt6.43□□□□□ -1.38
UBP3Q01477 YPK3YBR028C 1578 nt6.43□□□□□ -1.38
UBP3Q01477 ATG4YNL223W 1485 nt6.42□□□□□ -1.38
UBP3Q01477 PGK1YCR012W 1251 nt6.42□□□□□ -1.38
UBP3Q01477 TIM22YDL217C 624 nt6.42□□□□□ -1.38
UBP3Q01477 YDR124WYDR124W 975 nt6.42□□□□□ -1.38
UBP3Q01477 HSP31YDR533C 714 nt6.42□□□□□ -1.38
UBP3Q01477 TIM21YGR033C 720 nt6.42□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 51.9 ms