Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 VHS1YDR247W 1386 nt4.76□□□□□ -1.65
RPL40AP0CH08 RAT1YOR048C 3021 nt4.75□□□□□ -1.65
RPL40AP0CH08 YDL121CYDL121C 450 nt4.75□□□□□ -1.65
RPL40AP0CH08 YML101C-AYML101C-A 318 nt4.75□□□□□ -1.65
RPL40AP0CH08 YBL044WYBL044W 369 nt4.75□□□□□ -1.65
RPL40AP0CH08 DSC2YOL073C 969 nt4.75□□□□□ -1.65
RPL40AP0CH08 ODC2YOR222W 924 nt4.75□□□□□ -1.65
RPL40AP0CH08 COX11YPL132W 903 nt4.75□□□□□ -1.65
RPL40AP0CH08 FOL1YNL256W 2475 nt4.75□□□□□ -1.65
RPL40AP0CH08 STB3YDR169C 1542 nt4.75□□□□□ -1.65
RPL40AP0CH08 ABF1YKL112W 2196 nt4.75□□□□□ -1.65
RPL40AP0CH08 PRO2YOR323C 1371 nt4.75□□□□□ -1.65
RPL40AP0CH08 NTH2YBR001C 2343 nt4.74□□□□□ -1.65
RPL40AP0CH08 MAL13YGR288W 1422 nt4.74□□□□□ -1.65
RPL40AP0CH08 OCA5YHL029C 2040 nt4.74□□□□□ -1.65
RPL40AP0CH08 RML2YEL050C 1182 nt4.74□□□□□ -1.65
RPL40AP0CH08 MF(ALPHA)2YGL089C 363 nt4.74□□□□□ -1.65
RPL40AP0CH08 MTW1YAL034W-A 870 nt4.74□□□□□ -1.65
RPL40AP0CH08 HES1YOR237W 1305 nt4.73□□□□□ -1.65
RPL40AP0CH08 MPA43YNL249C 1629 nt4.73□□□□□ -1.65
RPL40AP0CH08 BIT2YBR270C 1638 nt4.73□□□□□ -1.65
RPL40AP0CH08 ROX3YBL093C 663 nt4.73□□□□□ -1.65
RPL40AP0CH08 CWC27YPL064C 906 nt4.73□□□□□ -1.65
RPL40AP0CH08 RAD57YDR004W 1383 nt4.73□□□□□ -1.65
RPL40AP0CH08 JEM1YJL073W 1938 nt4.73□□□□□ -1.65
RPL40AP0CH08 FRT2YAL028W 1587 nt4.73□□□□□ -1.65
RPL40AP0CH08 SNT2YGL131C 4212 nt4.73□□□□□ -1.65
RPL40AP0CH08 FAR10YLR238W 1437 nt4.72□□□□□ -1.65
RPL40AP0CH08 HXT14YNL318C 1623 nt4.72□□□□□ -1.65
RPL40AP0CH08 SPR6YER115C 576 nt4.72□□□□□ -1.65
RPL40AP0CH08 SLT2YHR030C 1455 nt4.72□□□□□ -1.65
RPL40AP0CH08 SYG1YIL047C 2709 nt4.72□□□□□ -1.65
RPL40AP0CH08 SNU71YGR013W 1863 nt4.71□□□□□ -1.66
RPL40AP0CH08 ULA1YPL003W 1389 nt4.71□□□□□ -1.66
RPL40AP0CH08 YDR161WYDR161W 1164 nt4.71□□□□□ -1.66
RPL40AP0CH08 GRS1YBR121C 2004 nt4.71□□□□□ -1.66
RPL40AP0CH08 MTQ2YDR140W 666 nt4.7□□□□□ -1.66
RPL40AP0CH08 CAB1YDR531W 1104 nt4.7□□□□□ -1.66
RPL40AP0CH08 YAL044W-AYAL044W-A 333 nt4.7□□□□□ -1.66
RPL40AP0CH08 MDY2YOL111C 639 nt4.7□□□□□ -1.66
RPL40AP0CH08 BUB3YOR026W 1026 nt4.7□□□□□ -1.66
RPL40AP0CH08 RGS2YOR107W 930 nt4.7□□□□□ -1.66
RPL40AP0CH08 RPL19AYBR084C-A 570 nt4.7□□□□□ -1.66
RPL40AP0CH08 DUG1YFR044C 1446 nt4.7□□□□□ -1.66
RPL40AP0CH08 LPL1YOR059C 1353 nt4.69□□□□□ -1.66
RPL40AP0CH08 BRF1YGR246C 1791 nt4.69□□□□□ -1.66
RPL40AP0CH08 DAK1YML070W 1755 nt4.69□□□□□ -1.66
RPL40AP0CH08 YGR035W-AYGR035W-A 222 nt4.69□□□□□ -1.66
RPL40AP0CH08 VHS2YIL135C 1311 nt4.69□□□□□ -1.66
RPL40AP0CH08 YJR124CYJR124C 1347 nt4.69□□□□□ -1.66
RPL40AP0CH08 GAL10YBR019C 2100 nt4.69□□□□□ -1.66
RPL40AP0CH08 FLC3YGL139W 2409 nt4.68□□□□□ -1.66
RPL40AP0CH08 VID27YNL212W 2349 nt4.68□□□□□ -1.66
RPL40AP0CH08 VBA1YMR088C 1689 nt4.68□□□□□ -1.66
RPL40AP0CH08 FAU1YER183C 636 nt4.68□□□□□ -1.66
RPL40AP0CH08 SPL2YHR136C 447 nt4.68□□□□□ -1.66
RPL40AP0CH08 PDI1YCL043C 1569 nt4.68□□□□□ -1.66
RPL40AP0CH08 IMA2YOL157C 1770 nt4.68□□□□□ -1.66
RPL40AP0CH08 COP1YDL145C 3606 nt4.67□□□□□ -1.66
RPL40AP0CH08 UBC8YEL012W 657 nt4.67□□□□□ -1.66
RPL40AP0CH08 MND2YIR025W 1107 nt4.67□□□□□ -1.66
RPL40AP0CH08 YLR157W-DYLR157W-D 213 nt4.67□□□□□ -1.66
RPL40AP0CH08 ACF2YLR144C 2340 nt4.67□□□□□ -1.66
RPL40AP0CH08 AVT3YKL146W 2079 nt4.66□□□□□ -1.66
RPL40AP0CH08 FAT3YKL187C 2253 nt4.66□□□□□ -1.66
RPL40AP0CH08 YDR541CYDR541C 1035 nt4.66□□□□□ -1.66
RPL40AP0CH08 COX4YGL187C 468 nt4.66□□□□□ -1.66
RPL40AP0CH08 PHO86YJL117W 936 nt4.66□□□□□ -1.66
RPL40AP0CH08 NMD4YLR363C 657 nt4.66□□□□□ -1.66
RPL40AP0CH08 BPL1YDL141W 2073 nt4.66□□□□□ -1.66
RPL40AP0CH08 RIM15YFL033C 5313 nt4.66□□□□□ -1.66
RPL40AP0CH08 TRP5YGL026C 2124 nt4.66□□□□□ -1.66
RPL40AP0CH08 YPL191CYPL191C 1083 nt4.65□□□□□ -1.67
RPL40AP0CH08 CEG1YGL130W 1380 nt4.65□□□□□ -1.67
RPL40AP0CH08 YMR027WYMR027W 1413 nt4.64□□□□□ -1.67
RPL40AP0CH08 YAP1802YGR241C 1707 nt4.64□□□□□ -1.67
RPL40AP0CH08 TKL1YPR074C 2043 nt4.64□□□□□ -1.67
RPL40AP0CH08 RCK1YGL158W 1539 nt4.64□□□□□ -1.67
RPL40AP0CH08 ALD3YMR169C 1521 nt4.64□□□□□ -1.67
RPL40AP0CH08 ALD2YMR170C 1521 nt4.64□□□□□ -1.67
RPL40AP0CH08 HST4YDR191W 1113 nt4.64□□□□□ -1.67
RPL40AP0CH08 FUN19YAL034C 1242 nt4.64□□□□□ -1.67
RPL40AP0CH08 VAN1YML115C 1608 nt4.64□□□□□ -1.67
RPL40AP0CH08 HRP1YOL123W 1605 nt4.64□□□□□ -1.67
RPL40AP0CH08 BNA5YLR231C 1362 nt4.64□□□□□ -1.67
RPL40AP0CH08 GLT1YDL171C 6438 nt4.64□□□□□ -1.67
RPL40AP0CH08 SEH1YGL100W 1050 nt4.63□□□□□ -1.67
RPL40AP0CH08 STE50YCL032W 1041 nt4.63□□□□□ -1.67
RPL40AP0CH08 SGV1YPR161C 1974 nt4.62□□□□□ -1.67
RPL40AP0CH08 SIF2YBR103W 1608 nt4.62□□□□□ -1.67
RPL40AP0CH08 YJL107CYJL107C 1164 nt4.62□□□□□ -1.67
RPL40AP0CH08 YNL174WYNL174W 573 nt4.62□□□□□ -1.67
RPL40AP0CH08 DCC1YCL016C 1143 nt4.62□□□□□ -1.67
RPL40AP0CH08 YCR023CYCR023C 1836 nt4.62□□□□□ -1.67
RPL40AP0CH08 EXO1YOR033C 2109 nt4.61□□□□□ -1.67
RPL40AP0CH08 AZR1YGR224W 1842 nt4.61□□□□□ -1.67
RPL40AP0CH08 ECM3YOR092W 1842 nt4.61□□□□□ -1.67
RPL40AP0CH08 YCR085WYCR085W 354 nt4.61□□□□□ -1.67
RPL40AP0CH08 GPM3YOL056W 912 nt4.61□□□□□ -1.67
RPL40AP0CH08 YPR071WYPR071W 636 nt4.61□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms