Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.7■■□□□ 1.38
COL4A2P08572 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.7■■□□□ 1.38
COL4A2P08572 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.7■■□□□ 1.38
COL4A2P08572 AC005703.6-201ENST00000623265 1329 ntBASIC23.7■■□□□ 1.38
COL4A2P08572 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL4A2P08572 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
COL4A2P08572 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
COL4A2P08572 AC092666.2-201ENST00000613287 246 ntBASIC23.7■■□□□ 1.38
COL4A2P08572 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
COL4A2P08572 MIR4767-201ENST00000582827 78 ntBASIC23.69■■□□□ 1.38
COL4A2P08572 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL4A2P08572 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
COL4A2P08572 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL4A2P08572 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL4A2P08572 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL4A2P08572 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
COL4A2P08572 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.67■■□□□ 1.38
COL4A2P08572 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL4A2P08572 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.67■■□□□ 1.38
COL4A2P08572 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL4A2P08572 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL4A2P08572 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL4A2P08572 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL4A2P08572 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.66■■□□□ 1.38
COL4A2P08572 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL4A2P08572 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL4A2P08572 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.66■■□□□ 1.38
COL4A2P08572 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
COL4A2P08572 SERBP1P1-201ENST00000396021 1160 ntBASIC23.66■■□□□ 1.38
COL4A2P08572 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
COL4A2P08572 MIR6821-201ENST00000617625 74 ntBASIC23.66■■□□□ 1.38
COL4A2P08572 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.66■■□□□ 1.38
COL4A2P08572 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
COL4A2P08572 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL4A2P08572 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL4A2P08572 AC011298.3-201ENST00000615796 283 ntBASIC23.65■■□□□ 1.38
COL4A2P08572 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.64■■□□□ 1.38
COL4A2P08572 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.64■■□□□ 1.38
COL4A2P08572 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL4A2P08572 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
COL4A2P08572 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL4A2P08572 AC097381.1-201ENST00000429019 1296 ntBASIC23.64■■□□□ 1.37
COL4A2P08572 AC091305.1-201ENST00000479476 895 ntBASIC23.64■■□□□ 1.37
COL4A2P08572 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.64■■□□□ 1.37
COL4A2P08572 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL4A2P08572 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.64■■□□□ 1.37
COL4A2P08572 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL4A2P08572 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL4A2P08572 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL4A2P08572 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.63■■□□□ 1.37
COL4A2P08572 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL4A2P08572 CA15P2-201ENST00000611168 834 ntBASIC23.63■■□□□ 1.37
COL4A2P08572 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL4A2P08572 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL4A2P08572 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.62■■□□□ 1.37
COL4A2P08572 AC027682.1-201ENST00000562846 899 ntBASIC23.62■■□□□ 1.37
COL4A2P08572 MIR6089-201ENST00000616698 64 ntBASIC23.62■■□□□ 1.37
COL4A2P08572 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.62■■□□□ 1.37
COL4A2P08572 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
COL4A2P08572 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL4A2P08572 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL4A2P08572 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
COL4A2P08572 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL4A2P08572 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL4A2P08572 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL4A2P08572 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.62■■□□□ 1.37
COL4A2P08572 AC087623.3-201ENST00000607047 1098 ntBASIC23.62■■□□□ 1.37
COL4A2P08572 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL4A2P08572 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
COL4A2P08572 RASA4CP-201ENST00000424092 1398 ntBASIC23.61■■□□□ 1.37
COL4A2P08572 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.61■■□□□ 1.37
COL4A2P08572 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.61■■□□□ 1.37
COL4A2P08572 C17orf82-201ENST00000623772 1530 ntBASIC23.61■■□□□ 1.37
COL4A2P08572 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.6■■□□□ 1.37
COL4A2P08572 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.6■■□□□ 1.37
COL4A2P08572 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.6■■□□□ 1.37
COL4A2P08572 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL4A2P08572 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.6■■□□□ 1.37
COL4A2P08572 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.6■■□□□ 1.37
COL4A2P08572 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.6■■□□□ 1.37
COL4A2P08572 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL4A2P08572 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL4A2P08572 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL4A2P08572 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COL4A2P08572 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
COL4A2P08572 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL4A2P08572 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
COL4A2P08572 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COL4A2P08572 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.59■■□□□ 1.37
COL4A2P08572 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL4A2P08572 SYT6-210ENST00000641643 1587 ntBASIC23.58■■□□□ 1.37
COL4A2P08572 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL4A2P08572 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.58■■□□□ 1.37
COL4A2P08572 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
COL4A2P08572 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.58■■□□□ 1.36
COL4A2P08572 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
COL4A2P08572 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.58■■□□□ 1.36
COL4A2P08572 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
COL4A2P08572 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
COL4A2P08572 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms