Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NKX2-8O15522 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.54■■□□□ 1.04
NKX2-8O15522 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.54■■□□□ 1.04
NKX2-8O15522 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NKX2-8O15522 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.54■■□□□ 1.04
NKX2-8O15522 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NKX2-8O15522 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NKX2-8O15522 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.53■■□□□ 1.04
NKX2-8O15522 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
NKX2-8O15522 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.53■■□□□ 1.04
NKX2-8O15522 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.53■■□□□ 1.04
NKX2-8O15522 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NKX2-8O15522 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.53■■□□□ 1.04
NKX2-8O15522 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NKX2-8O15522 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.53■■□□□ 1.04
NKX2-8O15522 MIR4767-201ENST00000582827 78 ntBASIC21.53■■□□□ 1.04
NKX2-8O15522 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.53■■□□□ 1.04
NKX2-8O15522 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
NKX2-8O15522 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.53■■□□□ 1.04
NKX2-8O15522 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NKX2-8O15522 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.53■■□□□ 1.04
NKX2-8O15522 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NKX2-8O15522 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NKX2-8O15522 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NKX2-8O15522 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.52■■□□□ 1.04
NKX2-8O15522 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.52■■□□□ 1.04
NKX2-8O15522 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.52■■□□□ 1.04
NKX2-8O15522 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
NKX2-8O15522 AC010501.1-201ENST00000606270 1962 ntBASIC21.52■■□□□ 1.04
NKX2-8O15522 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
NKX2-8O15522 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NKX2-8O15522 AC091305.1-201ENST00000479476 895 ntBASIC21.51■■□□□ 1.03
NKX2-8O15522 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.51■■□□□ 1.03
NKX2-8O15522 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.51■■□□□ 1.03
NKX2-8O15522 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.51■■□□□ 1.03
NKX2-8O15522 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.51■■□□□ 1.03
NKX2-8O15522 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NKX2-8O15522 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NKX2-8O15522 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NKX2-8O15522 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NKX2-8O15522 SERBP1P1-201ENST00000396021 1160 ntBASIC21.5■■□□□ 1.03
NKX2-8O15522 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
NKX2-8O15522 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.5■■□□□ 1.03
NKX2-8O15522 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.5■■□□□ 1.03
NKX2-8O15522 AC092171.4-201ENST00000609130 632 ntBASIC21.5■■□□□ 1.03
NKX2-8O15522 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NKX2-8O15522 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NKX2-8O15522 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-8O15522 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-8O15522 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
NKX2-8O15522 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-8O15522 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-8O15522 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-8O15522 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.49■■□□□ 1.03
NKX2-8O15522 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.49■■□□□ 1.03
NKX2-8O15522 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-8O15522 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.49■■□□□ 1.03
NKX2-8O15522 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.49■■□□□ 1.03
NKX2-8O15522 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-8O15522 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
NKX2-8O15522 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-8O15522 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-8O15522 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-8O15522 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-8O15522 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
NKX2-8O15522 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-8O15522 AC099791.2-201ENST00000605725 427 ntBASIC21.48■■□□□ 1.03
NKX2-8O15522 MIR6821-201ENST00000617625 74 ntBASIC21.48■■□□□ 1.03
NKX2-8O15522 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-8O15522 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-8O15522 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-8O15522 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.47■■□□□ 1.03
NKX2-8O15522 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.47■■□□□ 1.03
NKX2-8O15522 CA15P2-201ENST00000611168 834 ntBASIC21.47■■□□□ 1.03
NKX2-8O15522 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-8O15522 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
NKX2-8O15522 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
NKX2-8O15522 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.47■■□□□ 1.03
NKX2-8O15522 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
NKX2-8O15522 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
NKX2-8O15522 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NKX2-8O15522 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NKX2-8O15522 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
NKX2-8O15522 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.46■■□□□ 1.03
NKX2-8O15522 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NKX2-8O15522 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
NKX2-8O15522 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.46■■□□□ 1.03
NKX2-8O15522 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
NKX2-8O15522 RASA4CP-201ENST00000424092 1398 ntBASIC21.46■■□□□ 1.03
NKX2-8O15522 AC131274.2-201ENST00000580697 1507 ntBASIC21.45■■□□□ 1.02
NKX2-8O15522 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NKX2-8O15522 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.45■■□□□ 1.02
NKX2-8O15522 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NKX2-8O15522 AC097381.1-201ENST00000429019 1296 ntBASIC21.45■■□□□ 1.02
NKX2-8O15522 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.45■■□□□ 1.02
NKX2-8O15522 AC087623.3-201ENST00000607047 1098 ntBASIC21.45■■□□□ 1.02
NKX2-8O15522 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NKX2-8O15522 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
NKX2-8O15522 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.44■■□□□ 1.02
NKX2-8O15522 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms