Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC2Q9Y5Z7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC2Q9Y5Z7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC2Q9Y5Z7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC2Q9Y5Z7 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
HCFC2Q9Y5Z7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.84■□□□□ 0.13
HCFC2Q9Y5Z7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC2Q9Y5Z7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HCFC2Q9Y5Z7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
HCFC2Q9Y5Z7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.84■□□□□ 0.13
HCFC2Q9Y5Z7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
HCFC2Q9Y5Z7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.83■□□□□ 0.13
HCFC2Q9Y5Z7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
HCFC2Q9Y5Z7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.83■□□□□ 0.13
HCFC2Q9Y5Z7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.83■□□□□ 0.13
HCFC2Q9Y5Z7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HCFC2Q9Y5Z7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 AC010141.1-201ENST00000411585 623 ntBASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 RTN3P1-201ENST00000536295 711 ntBASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 RN7SL555P-201ENST00000584742 339 ntBASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCFC2Q9Y5Z7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 RCC2P8-201ENST00000502779 1035 ntBASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AC019193.1-201ENST00000506678 823 ntBASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AC090857.1-201ENST00000527400 390 ntBASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AC242376.1-201ENST00000559033 726 ntBASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AL132994.2-201ENST00000603120 687 ntBASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AC138696.2-201ENST00000607376 223 ntBASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AC006453.1-201ENST00000636037 1257 ntBASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCFC2Q9Y5Z7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms