Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 REXO1L6P-201ENST00000603433 1515 ntBASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 EIF3FP3-201ENST00000434851 1086 ntBASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 AL590640.2-201ENST00000457038 527 ntBASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 RNA5SP486-201ENST00000515961 83 ntBASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 AC020658.6-201ENST00000623564 1870 ntBASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 TUBB1P2-201ENST00000422712 1306 ntBASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 TUBB1P1-201ENST00000503144 1300 ntBASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLCF1Q9UBD9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 CD8B2-202ENST00000417670 633 ntBASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 AL355994.2-201ENST00000447882 704 ntBASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 AC092658.1-201ENST00000505836 891 ntBASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 DUX4L45-201ENST00000566406 1057 ntBASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.6□□□□□ -0.23
CLCF1Q9UBD9 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms