Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 AL161772.1-201ENST00000610494 4412 ntBASIC15.88■□□□□ 0.13
HPS4Q9NQG7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 ACTBP8-201ENST00000403258 1108 ntBASIC15.87■□□□□ 0.13
HPS4Q9NQG7 MIR1202-201ENST00000408529 83 ntBASIC15.87■□□□□ 0.13
HPS4Q9NQG7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 AC006033.1-201ENST00000440505 426 ntBASIC15.87■□□□□ 0.13
HPS4Q9NQG7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 RNA5SP486-201ENST00000515961 83 ntBASIC15.87■□□□□ 0.13
HPS4Q9NQG7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 MIR4741-201ENST00000579822 90 ntBASIC15.87■□□□□ 0.13
HPS4Q9NQG7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 AL139099.5-201ENST00000635274 300 ntBASIC15.87■□□□□ 0.13
HPS4Q9NQG7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS4Q9NQG7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 Z93015.1-201ENST00000451718 390 ntBASIC15.86■□□□□ 0.13
HPS4Q9NQG7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms