Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.68■□□□□ 0.74
ABCA3Q99758 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ABCA3Q99758 PYY2-201ENST00000315776 282 ntBASIC19.68■□□□□ 0.74
ABCA3Q99758 BAK1P1-201ENST00000317045 636 ntBASIC19.68■□□□□ 0.74
ABCA3Q99758 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ABCA3Q99758 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ABCA3Q99758 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ABCA3Q99758 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ABCA3Q99758 AL035414.1-201ENST00000451327 857 ntBASIC19.68■□□□□ 0.74
ABCA3Q99758 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC19.68■□□□□ 0.74
ABCA3Q99758 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC19.68■□□□□ 0.74
ABCA3Q99758 KRT8P1-201ENST00000557533 1207 ntBASIC19.68■□□□□ 0.74
ABCA3Q99758 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC19.68■□□□□ 0.74
ABCA3Q99758 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC19.68■□□□□ 0.74
ABCA3Q99758 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC19.68■□□□□ 0.74
ABCA3Q99758 HMGB1P24-201ENST00000611897 328 ntBASIC19.68■□□□□ 0.74
ABCA3Q99758 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC19.68■□□□□ 0.74
ABCA3Q99758 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC19.68■□□□□ 0.74
ABCA3Q99758 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCA3Q99758 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ABCA3Q99758 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.67■□□□□ 0.74
ABCA3Q99758 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCA3Q99758 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCA3Q99758 AC025183.3-201ENST00000623526 1482 ntBASIC19.67■□□□□ 0.74
ABCA3Q99758 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ABCA3Q99758 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.67■□□□□ 0.74
ABCA3Q99758 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.67■□□□□ 0.74
ABCA3Q99758 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ABCA3Q99758 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCA3Q99758 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCA3Q99758 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ABCA3Q99758 PPIA-208ENST00000489459 907 ntTSL 2 BASIC19.67■□□□□ 0.74
ABCA3Q99758 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC19.67■□□□□ 0.74
ABCA3Q99758 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC19.67■□□□□ 0.74
ABCA3Q99758 AP003398.1-201ENST00000531124 318 ntBASIC19.67■□□□□ 0.74
ABCA3Q99758 USB1-205ENST00000561743 1135 ntTSL 3 BASIC19.67■□□□□ 0.74
ABCA3Q99758 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ABCA3Q99758 PPIA-210ENST00000620047 827 ntTSL 5 BASIC19.67■□□□□ 0.74
ABCA3Q99758 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC19.67■□□□□ 0.74
ABCA3Q99758 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ABCA3Q99758 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.67■□□□□ 0.74
ABCA3Q99758 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCA3Q99758 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ABCA3Q99758 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCA3Q99758 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ABCA3Q99758 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.67■□□□□ 0.74
ABCA3Q99758 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC19.67■□□□□ 0.74
ABCA3Q99758 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC19.66■□□□□ 0.74
ABCA3Q99758 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA3Q99758 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ABCA3Q99758 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
ABCA3Q99758 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ABCA3Q99758 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA3Q99758 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA3Q99758 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ABCA3Q99758 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA3Q99758 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC19.66■□□□□ 0.74
ABCA3Q99758 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA3Q99758 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA3Q99758 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
ABCA3Q99758 AC068867.1-201ENST00000559855 150 ntBASIC19.66■□□□□ 0.74
ABCA3Q99758 AC140113.1-201ENST00000603467 169 ntBASIC19.66■□□□□ 0.74
ABCA3Q99758 AL451007.2-201ENST00000632004 563 ntBASIC19.66■□□□□ 0.74
ABCA3Q99758 AC002472.4-201ENST00000641915 272 ntBASIC19.66■□□□□ 0.74
ABCA3Q99758 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA3Q99758 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA3Q99758 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
ABCA3Q99758 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.66■□□□□ 0.74
ABCA3Q99758 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA3Q99758 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA3Q99758 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA3Q99758 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA3Q99758 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA3Q99758 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.66■□□□□ 0.74
ABCA3Q99758 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.66■□□□□ 0.74
ABCA3Q99758 PKD1P6-201ENST00000343738 4769 ntBASIC19.66■□□□□ 0.74
ABCA3Q99758 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCA3Q99758 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCA3Q99758 OR8T1P-201ENST00000421347 918 ntBASIC19.65■□□□□ 0.74
ABCA3Q99758 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCA3Q99758 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCA3Q99758 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCA3Q99758 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
ABCA3Q99758 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ABCA3Q99758 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC19.65■□□□□ 0.74
ABCA3Q99758 DGAT2L7P-201ENST00000602462 744 ntBASIC19.65■□□□□ 0.74
ABCA3Q99758 PEBP1P2-201ENST00000603980 558 ntBASIC19.65■□□□□ 0.74
ABCA3Q99758 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
ABCA3Q99758 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCA3Q99758 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.65■□□□□ 0.74
ABCA3Q99758 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.65■□□□□ 0.74
ABCA3Q99758 API5-208ENST00000531273 1868 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCA3Q99758 MRPL37P1-201ENST00000592451 1337 ntBASIC19.65■□□□□ 0.74
ABCA3Q99758 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCA3Q99758 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC19.65■□□□□ 0.74
ABCA3Q99758 AC090616.6-203ENST00000579186 1945 ntBASIC19.65■□□□□ 0.74
ABCA3Q99758 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCA3Q99758 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCA3Q99758 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.65■□□□□ 0.74
ABCA3Q99758 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms