Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC00477Q96M19 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC00477Q96M19 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC00477Q96M19 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC00477Q96M19 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
LINC00477Q96M19 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC00477Q96M19 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.55□□□□□ -0.56
LINC00477Q96M19 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC00477Q96M19 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
LINC00477Q96M19 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
LINC00477Q96M19 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
LINC00477Q96M19 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC00477Q96M19 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC00477Q96M19 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
LINC00477Q96M19 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00477Q96M19 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 RDX-218ENST00000544551 4117 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 AC005089.1-201ENST00000619486 2241 ntBASIC11.54□□□□□ -0.56
LINC00477Q96M19 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 TOMM22P5-201ENST00000416399 439 ntBASIC11.54□□□□□ -0.56
LINC00477Q96M19 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 KRT18P43-201ENST00000469825 1281 ntBASIC11.54□□□□□ -0.56
LINC00477Q96M19 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 AL512356.2-201ENST00000546955 174 ntBASIC11.54□□□□□ -0.56
LINC00477Q96M19 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.54□□□□□ -0.56
LINC00477Q96M19 LINC00628-201ENST00000628516 1289 ntBASIC11.54□□□□□ -0.56
LINC00477Q96M19 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00477Q96M19 AC007686.3-201ENST00000619017 3487 ntBASIC11.54□□□□□ -0.56
LINC00477Q96M19 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00477Q96M19 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.54□□□□□ -0.56
LINC00477Q96M19 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00477Q96M19 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00477Q96M19 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00477Q96M19 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00477Q96M19 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00477Q96M19 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
LINC00477Q96M19 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00477Q96M19 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00477Q96M19 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00477Q96M19 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00477Q96M19 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
LINC00477Q96M19 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
LINC00477Q96M19 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00477Q96M19 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms