Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 KRT18P25-201ENST00000508931 1278 ntBASIC13.6□□□□□ -0.23
APH1AQ96BI3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 MIR5189-201ENST00000577370 114 ntBASIC13.6□□□□□ -0.23
APH1AQ96BI3 CLUHP6-201ENST00000580789 941 ntBASIC13.6□□□□□ -0.23
APH1AQ96BI3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 AC148477.4-201ENST00000613430 1793 ntBASIC13.6□□□□□ -0.23
APH1AQ96BI3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.6□□□□□ -0.23
APH1AQ96BI3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APH1AQ96BI3 AC112693.3-201ENST00000624819 1983 ntBASIC13.6□□□□□ -0.23
APH1AQ96BI3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
APH1AQ96BI3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 AC007787.1-201ENST00000588095 1583 ntBASIC13.59□□□□□ -0.23
APH1AQ96BI3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 ACKR1-201ENST00000368121 1240 ntBASIC13.59□□□□□ -0.23
APH1AQ96BI3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms