Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SSR4P1-203ENST00000599569 2260 ntBASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 AC103810.3-201ENST00000583567 96 ntBASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 AHCYP2-201ENST00000430630 1300 ntBASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 LRRC59-203ENST00000576448 1531 ntBASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 AC136621.1-201ENST00000624017 2304 ntBASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 AC148477.4-201ENST00000613430 1793 ntBASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 MIR326-201ENST00000362220 95 ntBASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 AC068418.2-201ENST00000577309 3703 ntBASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A1Q93050 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 MIR1202-201ENST00000408529 83 ntBASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 BCYRN1-201ENST00000418539 200 ntBASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 AL590640.2-201ENST00000457038 527 ntBASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 FAM86HP-204ENST00000513466 959 ntBASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 RNA5SP486-201ENST00000515961 83 ntBASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A1Q93050 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms