Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LMX1AQ8TE12 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.87□□□□□ -0.03
LMX1AQ8TE12 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LMX1AQ8TE12 HYMAI-201ENST00000635591 3347 ntBASIC14.87□□□□□ -0.03
LMX1AQ8TE12 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
LMX1AQ8TE12 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LMX1AQ8TE12 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LMX1AQ8TE12 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LMX1AQ8TE12 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 AC079178.1-201ENST00000420915 656 ntBASIC14.86□□□□□ -0.03
LMX1AQ8TE12 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 AL391280.1-201ENST00000506969 1062 ntBASIC14.86□□□□□ -0.03
LMX1AQ8TE12 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.86□□□□□ -0.03
LMX1AQ8TE12 RN7SL713P-201ENST00000582127 302 ntBASIC14.86□□□□□ -0.03
LMX1AQ8TE12 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 AC244157.2-201ENST00000616239 1006 ntBASIC14.86□□□□□ -0.03
LMX1AQ8TE12 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.86□□□□□ -0.03
LMX1AQ8TE12 KRT8P4-201ENST00000509735 1454 ntBASIC14.86□□□□□ -0.03
LMX1AQ8TE12 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMX1AQ8TE12 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 AL391005.1-201ENST00000623953 2435 ntBASIC14.85□□□□□ -0.03
LMX1AQ8TE12 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.85□□□□□ -0.03
LMX1AQ8TE12 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 AC004898.1-201ENST00000451057 766 ntBASIC14.85□□□□□ -0.03
LMX1AQ8TE12 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.85□□□□□ -0.03
LMX1AQ8TE12 AL603764.1-201ENST00000636452 321 ntBASIC14.85□□□□□ -0.03
LMX1AQ8TE12 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMX1AQ8TE12 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LMX1AQ8TE12 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms