Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 HLA-K-203ENST00000430151 1046 ntBASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 BASP1P1-201ENST00000430708 665 ntBASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 TPRX2P-201ENST00000535362 881 ntBASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 AL049840.4-201ENST00000602422 811 ntBASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 AC005089.1-201ENST00000619486 2241 ntBASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 AL138799.1-201ENST00000448213 1675 ntBASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 SPDYE19P-201ENST00000338590 713 ntBASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 GNAQP1-201ENST00000444815 1067 ntBASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 AC093214.1-201ENST00000511688 1107 ntBASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD1LQ86WJ1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 AL158070.2-201ENST00000623713 1621 ntBASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 VDAC1P7-201ENST00000462417 847 ntBASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 AC092183.1-201ENST00000469884 875 ntBASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms