Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 AL807761.2-201ENST00000422849 729 ntBASIC12.56□□□□□ -0.4
CSMD2Q7Z408 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 AC068867.1-201ENST00000559855 150 ntBASIC12.56□□□□□ -0.4
CSMD2Q7Z408 AC087392.5-201ENST00000612517 489 ntBASIC12.56□□□□□ -0.4
CSMD2Q7Z408 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 BAK1P1-201ENST00000317045 636 ntBASIC12.55□□□□□ -0.4
CSMD2Q7Z408 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 AL645933.1-201ENST00000440087 609 ntBASIC12.55□□□□□ -0.4
CSMD2Q7Z408 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 AC007952.4-201ENST00000573866 637 ntBASIC12.55□□□□□ -0.4
CSMD2Q7Z408 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 LINC01815-202ENST00000641468 1409 ntBASIC12.55□□□□□ -0.4
CSMD2Q7Z408 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 KRT17P5-201ENST00000332088 839 ntBASIC12.55□□□□□ -0.4
CSMD2Q7Z408 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 FTH1P22-201ENST00000456305 520 ntBASIC12.55□□□□□ -0.4
CSMD2Q7Z408 RN7SL494P-201ENST00000461517 304 ntBASIC12.55□□□□□ -0.4
CSMD2Q7Z408 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 FRMPD2B-201ENST00000431305 1347 ntBASIC12.55□□□□□ -0.4
CSMD2Q7Z408 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC12.55□□□□□ -0.4
CSMD2Q7Z408 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 BANF1P3-201ENST00000412556 261 ntBASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC106047.2-201ENST00000511723 743 ntBASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 RN7SL470P-201ENST00000583069 259 ntBASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD2Q7Z408 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms