Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 AL359258.3-201ENST00000622910 2331 ntBASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 AL391280.1-201ENST00000506969 1062 ntBASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 COX5BP1-201ENST00000507622 393 ntBASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 AP001258.2-201ENST00000529891 490 ntBASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 OR10B1P-201ENST00000601666 907 ntBASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 AC073413.1-201ENST00000603927 732 ntBASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 HYMAI-201ENST00000635591 3347 ntBASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNFT1Q5M7Z0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 DUX4L47-201ENST00000566374 394 ntBASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 RN7SL713P-201ENST00000582127 302 ntBASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 PPY2P-201ENST00000582808 702 ntBASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms